Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0071 ATGCAAATAAAGATTATTACAGATCGAATTTTCGACACCGTAAAGAATGATAGAGGAAGAGCTAATTTGAAATTTGAAGATCTGTATATTGCTGTTTTACTTGTGTACAATGATATCAATAAGTTTTTGCCTGTTACACATATTGATCCTCCATCCAAAGCCAAAGTCAGAGAAATCATGAAGGAATGTGACATCAACTTTGATGGAGAAATTGATCGAAACGAATTTTATGACTTCATCAAGCAGATCACATCAGATACAGTCACGATCGTCAGTAAACGACTCATCCTCACCTTCGCCATAGCACCAACGGTCGCCATGCTAACAAAGAAAATCACAGAAGGGATCCCACATGTTGGGAATATGGTTAGATGGTTACCCAATTCAGTTTATGCTTCAACTGTGACACTTGCAGTTTGGTGGCACCAAAAACAAAAACTCAGTTGA 447 0.3781 MQIKIITDRIFDTVKNDRGRANLKFEDLYIAVLLVYNDINKFLPVTHIDPPSKAKVREIMKECDINFDGEIDRNEFYDFIKQITSDTVTIVSKRLILTFAIAPTVAMLTKKITEGIPHVGNMVRWLPNSVYASTVTLAVWWHQKQKLS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0071 148 PANTHER CALCIUM-BINDING EF HAND PROTEIN 2 146 - -
Amo02g0071 148 PANTHER S100 CALCIUM-BINDING PROTEIN 2 146 - -
Amo02g0071 148 ProSiteProfiles EF-hand calcium-binding domain profile. 51 86 IPR002048 GO:0005509
Amo02g0071 148 SMART efh_1 55 83 IPR002048 GO:0005509
Amo02g0071 148 Gene3D - 3 94 - -
Amo02g0071 148 SUPERFAMILY EF-hand 22 85 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0071 Amo-Chr2 844376 845985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0071 2 141 EF-hand Containing Proteins AT1G64850 62.143 2.79e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0071 - - ahf:112777082 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0756 19 11932376 11933334 Amo02g0071 02 844376 845985 hybridization