Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4243 ATGGCAGGCGACAGGAGCAAGAAGCTCAAAGCTTCTGAAAAGTCCGAGAATTTGGACGAAGTTCACGGACAGCTCCTCATCAACATCGAGAAATTGCAACAGATCCAAGACGACCTCGAAAAGATTAATGACAAGGCAGGTGATGAAGTTCTGGAGATAGAACAGAAGTACAATGAGATTAGGAAACCGATTTACGACAAACGAAACGAATTGATCAAATCTATTCCTGATTTCTGGTTGACTGCATTTATGAGTCATCCCACTCTCTCTGAGCTTCTGAATGAGGAAGACATAAAGATATTTAAGTATTTGGCTTCTCTCGAAGTTGAAGATCATAAAGATGTCAAATCAGGCTTCAAAATCACCCTTAATTTCAATCCAAATCCTTATTTTGAGGAAACAAAGCTTGTAAAGACCTTTAATTTCCTTGAAGAGGGAACAACAAAAATTACTGCCACCCCCATAAAATGGAAAGAGGGCAAGGGCATACCCAATGGAGTCAGTCATGAGGATAAAGGGAACAAGCGGACTCTTGATGATATCAGTTTCTTTAGCTGGTTTAGTGACTGTGAGCAGAAAGATGATATGGATGAGATTCATGATGAGGTTGCAGAAATAATCAAGGATGATTTATGGCCAAACCCACTCACTTATGTCAACAATGAGGAGATTGATGACGAGGATGGTGATGATGAAGCTAATGATGAGGAAAATGATGAGGATGATTCTGAAGACGATGATCAAGAGGATGAAGATGACGAGGAAGATGATGACAACGATGACGATAATGGCAATTGA 798 0.401 MAGDRSKKLKASEKSENLDEVHGQLLINIEKLQQIQDDLEKINDKAGDEVLEIEQKYNEIRKPIYDKRNELIKSIPDFWLTAFMSHPTLSELLNEEDIKIFKYLASLEVEDHKDVKSGFKITLNFNPNPYFEETKLVKTFNFLEEGTTKITATPIKWKEGKGIPNGVSHEDKGNKRTLDDISFFSWFSDCEQKDDMDEIHDEVAEIIKDDLWPNPLTYVNNEEIDDEDGDDEANDEENDEDDSEDDDQEDEDDEEDDDNDDDNGN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4243 265 MobiDBLite consensus disorder prediction 217 265 - -
Amo01g4243 265 Coils Coil 29 49 - -
Amo01g4243 265 Pfam Nucleosome assembly protein (NAP) 73 218 IPR002164 GO:0005634|GO:0006334
Amo01g4243 265 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 4 251 IPR002164 GO:0005634|GO:0006334
Amo01g4243 265 SUPERFAMILY NAP-like 8 218 IPR037231 -
Amo01g4243 265 MobiDBLite consensus disorder prediction 221 265 - -
Amo01g4243 265 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 4 251 - -
Amo01g4243 265 Gene3D Nucleosome assembly protein 76 224 - -
Amo01g4243 265 Gene3D - 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4243 Amo-Chr1 118114381 118117586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4243 K11290 - gmx:100793432 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g4243 01 118114381 118117586 Amo11g2225 11 122074190 122076878 hybridization