Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4034 ATGCCGGTTTCGACACGGTCTCAGATGACGCCGAACCCGGTTCGAGACGAACCGGACTCGCGGCTGAGGAACCCGCACCATGGCCTGAAGGAGAAGCTTAGGGCACTGACAATGCTCTACGAGCAGCAGAAGCAAGCTTCTCAAGCTCTCAAGAACCCTTCCCTGAAGTTCCAAAATGAACAGAGCAACGAAAACAACAGACAAGAACAGAGTAAAACAGAGAGCAGAATCATGAGAGAGAACAAAATGTACAGCCTTCTTCCAAATTCGACCGTTACAAGAACCTTCGTGTTGCCACAACCACTACCACCACCACCACCACCACCACCACCATCACGCGCCGCCACCGCCACTGCCGCCGACGAAGACACAAAGGAGAACCTTCCAGTTCTTGGAACCGACCGAATCGTTGGGTTTTCGTGCCAGAGAAAATCCACAACGACAAAAAATACAACAATGGTTTCGGATTCTGCTTCCAACACGGTGGCTAGGAAGCTGTCGATGGGGGCAGCGGCGGCGCCGGTGGCGACGTCGGCGGAGGAGAGTTCGGAGAAACAGGGGAAGGTGGATGGGAATGGGAGCAGGATCCTCGTGTTTGTGAGGCTTAGGCCTATGAACAAGAAGGAGAAAGAAGCGGGTTCACGGTGCTCCGTTAGGGTCGTTAATCGCCGTGACGTTTATCTAACGGAATTTGCGAACGAGAACGATTATCTGAGGCTGAATAGGGTTCGTGGAAGGCACTTCACTTTTGATGCTGCGTTTCCTGAATCGGCTACTCAGCAAGAAGTTTATTCAACTACGACCTCAGAACTAGTGGAAGCAGTTCTGCAAGGGAGGAATGGTTCAGTGTTCTGTTATGGTGCCACGGGGGCTGGAAAGACTTACACCATGCTCGGCACCGTAGAGAATCCTGGAGTGATGGTATTGGCAATCAAAGATGTTTTTAGCAAAATCAGGCAGAGAAGTTGTGATGGGAACCATGTTGTTCATCTGTCGTATCTTGAGGTCTACAATGAAACAGTTAGGGATTTACTTTCCCCTGGAAGGCCTCTGGTTCTTAGAGAAGATAAACAGGGGATTGTGGCAGCAGGTCTTACACAATATAGAGCTTATTCCACAGATGAAGTTATGGCATTGCTGCAACAAGGAAATCAGAACAGAACCACTGAACCAACTCGTGCGAATGAAACATCTTCGCGTTCACATGCAATTTTGCAGGTTGTGATTGAATACCGAGTTAGGGATGCAGCGATGAATATAGTTAATCGTGTGGGAAAGCTCTCATTGATTGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACAGATCAAAGAACACTTAGATCTCTTGAGGGCGCTAACATAAACCGGTCTCTCCTTGCACTAAGCAGCTGCATAAATGCTCTTGTGGAAGGCAAAAAACACATACCATATAGGAATTCCAAACTCACTCAACTCCTCAAGGACTCATTAGGAGGAACATGTAACACTATCATGATTGCGAACATAAGCCCAAGTAACCTCTCATTTGGCGAAACACAGAATACTGTTCACTGGGCCGATAGAGCCAAGGAGATTCGGACAAAGGTAAGAGATGCTAATGAGGATCAATTGCCAGTGCCGGAGACAGAAACTGACCAGGCCAAGTTGGTAATCGAGCTGCAAAAGGAGAATCGTGAATTGAGAATGCAGCTAGCGAAGCAGCAACAGAAATTGTTGACTGTTCAAGCACAGTCCTTGGCTGCGCAATCCTCTCCAACACCGCCTTCAGCTTCAGCTCTTTCTACTCCTCCAACATCCACACAGCCTAACCAAAAACGAAGGACTAGATCTTCTTTCCTCTCGGGAACTTGTTTCACTCCAGAATCCAACAAGAAGAAAGGAGCTGAGCTAGCTGTGAGAACACTCAACCGAACCGTGAAAGCACTGGAGGCAGAGATCGAGAGAATGAAGAAAGATCATAGTTTGCAGCTAAAGCAAAAAGATGATCTTATTCGCGAGCTTTCACAAAAGGGTGGAATTCAAACCACTGCAGCAACAACAGCAGAAGAAGTAAGGAAGAGAGTGTTGACCAGGGCTAGCCTAAGGCTAAAGGAGTCAAGCAATGGCGAGTTGAAGAGTCCAAGCCATCGCTTTCGATCACCAGTCCAAGTTGCCAAGAAGAGAAGCTTTTGGGACATAACCACATCTAACAGCCCATCTATTGCAACATTTAATGGCAGAAAAACCAGAAGTCATGTCATTCCTGAACCTACTACTGCACCCCCTCCATCAATGCTTCTTCAGCCTGGTTTTGCTCGGCAAAAAGCGAATATTTAA 2316 0.4775 MPVSTRSQMTPNPVRDEPDSRLRNPHHGLKEKLRALTMLYEQQKQASQALKNPSLKFQNEQSNENNRQEQSKTESRIMRENKMYSLLPNSTVTRTFVLPQPLPPPPPPPPPSRAATATAADEDTKENLPVLGTDRIVGFSCQRKSTTTKNTTMVSDSASNTVARKLSMGAAAAPVATSAEESSEKQGKVDGNGSRILVFVRLRPMNKKEKEAGSRCSVRVVNRRDVYLTEFANENDYLRLNRVRGRHFTFDAAFPESATQQEVYSTTTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVENPGVMVLAIKDVFSKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNQNRTTEPTRANETSSRSHAILQVVIEYRVRDAAMNIVNRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGTCNTIMIANISPSNLSFGETQNTVHWADRAKEIRTKVRDANEDQLPVPETETDQAKLVIELQKENRELRMQLAKQQQKLLTVQAQSLAAQSSPTPPSASALSTPPTSTQPNQKRRTRSSFLSGTCFTPESNKKKGAELAVRTLNRTVKALEAEIERMKKDHSLQLKQKDDLIRELSQKGGIQTTAATTAEEVRKRVLTRASLRLKESSNGELKSPSHRFRSPVQVAKKRSFWDITTSNSPSIATFNGRKTRSHVIPEPTTAPPPSMLLQPGFARQKANI* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4034 771 MobiDBLite consensus disorder prediction 40 66 - -
Amo01g4034 771 Pfam Kinesin motor domain 201 525 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g4034 771 MobiDBLite consensus disorder prediction 1 79 - -
Amo01g4034 771 PANTHER KINESIN-LIKE PROTEIN 180 764 - -
Amo01g4034 771 ProSitePatterns Kinesin motor domain signature. 425 436 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo01g4034 771 ProSiteProfiles Kinesin motor domain profile. 195 525 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g4034 771 MobiDBLite consensus disorder prediction 98 123 - -
Amo01g4034 771 PRINTS Kinesin heavy chain signature 278 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g4034 771 PRINTS Kinesin heavy chain signature 392 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g4034 771 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g4034 771 PRINTS Kinesin heavy chain signature 426 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g4034 771 MobiDBLite consensus disorder prediction 576 626 - -
Amo01g4034 771 MobiDBLite consensus disorder prediction 576 621 - -
Amo01g4034 771 MobiDBLite consensus disorder prediction 735 771 - -
Amo01g4034 771 MobiDBLite consensus disorder prediction 98 114 - -
Amo01g4034 771 Gene3D Kinesin motor domain 188 531 IPR036961 -
Amo01g4034 771 PANTHER KINESIN-RELATED 180 764 IPR027640 GO:0003777|GO:0007018
Amo01g4034 771 Coils Coil 550 577 - -
Amo01g4034 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 570 IPR027417 -
Amo01g4034 771 MobiDBLite consensus disorder prediction 16 34 - -
Amo01g4034 771 SMART kinesin_4 193 533 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g4034 771 Coils Coil 625 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4034 Amo-Chr1 114512894 114517385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4034 131 573 Miscellaneous Gene Families AT2G21380 34.071 7.41e-60 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4034 K10401 - gmx:100798358 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g4034 01 114512894 114517385 Amo11g2481 11 130573032 130577295 hybridization