Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3431 ATGGCAGTTACACATGCTGATCTCGAACCAAACACAGGGAAGACATGTTTGATGAGCAGCAAAACTGGTGTGTTCCTCGTACTTGTCACAATCCTATTGGGACTCTCCTCCTTCACTCTCTGCCTCATAGCAGAAGCCACACGTTCTCAGGTGACATGGATGAACACAAGAAAAACAGAATGTGTATACAGAAGTAGCGGGAAAACGCCATTGGTATGTGCTGCTTGTGCTTTTGTTGTGCTAGCAATGGCCATGGTTATGGAGCATACTTATCTCTTAATCACAGTTAGTAAATCATCGCCAACCTTACTTCACTTGGATCCTGAATCCCCTTCTGCCAACTCCTTAGCCTCCCATGCTGGATTTTTCTTCATCACTACCTGGATATGTTTTGCGATTGGGGAGATTCTGCTGCTAGCAGGAGTGAGTGTAGAATCAGGGCATCTGAAGAATTGGTCAAAGCCAAGACACACATGCCACGTCATCAGAAGAGGCTTGTTCTCTTGTGCTGCTGTCTTTGCTTTGACCACGGTTTCATTAGCTTCTGCCTTATACCTCACAGCAGTTCGTGCCCAAAGGTTGTCACGCCAACTAGAACAACATTCTAGAACCCAAGTTCTTCACTCATCTGAACCCATTGTAGTATTCCATGACCATGCCAATGCTTCTCCTTCTCCACCTCAACCAACGAAAGACACTACACTATTTTCCGTCTACAAATTATAG 726 0.4518 MAVTHADLEPNTGKTCLMSSKTGVFLVLVTILLGLSSFTLCLIAEATRSQVTWMNTRKTECVYRSSGKTPLVCAACAFVVLAMAMVMEHTYLLITVSKSSPTLLHLDPESPSANSLASHAGFFFITTWICFAIGEILLLAGVSVESGHLKNWSKPRHTCHVIRRGLFSCAAVFALTTVSLASALYLTAVRAQRLSRQLEQHSRTQVLHSSEPIVVFHDHANASPSPPQPTKDTTLFSVYKL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3431 241 PANTHER OS07G0462200 PROTEIN-RELATED 18 213 - -
Amo01g3431 241 Pfam Protein of unknown function (DUF1218) 77 178 IPR009606 -
Amo01g3431 241 PANTHER OS05G0433100 PROTEIN 18 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3431 Amo-Chr1 106893119 106895034 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3431 - - lang:109333801 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3431 01 106893119 106895034 Amo04g0234 04 3699356 3701851 PCT
Amo04g0234 04 3699356 3701851 Amo01g3431 01 106893119 106895034 PCT