Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2767 ATGGTGGTGAAGAAGCCAAGGATTGTGATAGTTGGAGCAGGAATGGCAGGGCTCACTGCTGCCAACAAGCTCCACAGTGTGACAGCCTCAAAGGACTTGTTTGAGGTTTGTGTTGTGGAAGGTGGAAGCAGGATTGGAGGGAGAATCAACACCTCTGAGTTCTGTGGTGACCAGATTGAGCTTGGTGCTACTTGGATCCATGGAATTGGAGGAAGCCCTCTTCACAAGATTGCTCAACAAACACACTCATTGCTTTCTGACAAGCCTTGGGAGTGCATGGATGGAAACTCATCAGATCAAACCACCATCACCATTGCTGAAGGTGGCTTCCACTTGGACCCTTCCATTGTAAACCCCATCACAAGGCTCTTCAAGAACCTCATGGATCATGCTCAGGGCAAGAACCAGAAGAACAACATCACTGAACGAGATACTACTGCAAGAGGTGATGAATTTCTTCACAGCTTCTGTAAGAAGGTGTCAACAAGAGTTGGCTCTGCAGGCCTTAGTATTGGTTCTTTCCTCAGGGGAGGCCTTGATGCATACTGGGATTCCTCAAAGGATCAAGAGGAGTTCAAAGGGTGTGGGATATGGAACAGGAAGTTGCTTGAAGAAGCAATCTTTGCAATGCATGAGAACACGCAGAGGACATACACATCTGCCGGTGATCTCTTGAACCTTGATTACAATGCTGAGAGTGAATACCAAATGTTCCCTGGTGAAGAAATCACCATTGCCAAAGGCTACTTGAGCATAATTGAGTACTTGGCTTCTGCTCTACCGCCGGGGGTAATTCAGTTAGGTAGAAAAGTCACAAGAATTCAATGGCAACCAGAGAGACATGAACAAAATGGTTTCTGTTCTTCTAGGCCTGTGAAGCTACACTTCTGTGATGGATCAGTTATGCATGCTGATCATGTCATTATCACTGTTTCACTTGGAGTGCTAAAAGCTGCTATTGGTGATGATCAAGGTATGTTTCAGCCCCCTCTTCCAAATTATAAGGCTGAAGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGCCCAACAACACATCATTGTAAAGACGGTCATCACCGCCCTAAAAGGTTCCCATACTTGCAATTGGTTTTTCATTCACCTCACTCTGAGATGAGGCACAAGAAGATACCTTGGTGGATGAGGAGGTCACCTACCCTTTGTCCAATCTACAAGAATTCCAGTGTCCTCCTTTGTTGGTTTGCTGGGGAAGAAGCAAAGGCACTTGAGTCACTCAAAGATGAAGAGATCATTAATGGAGCTTCAGACACATTCTCCAGCTTTCTGTGTTCTGGTTATTCATACAATGAAGTTCAGTTCAGCAAAGTGTTGAAGACAAAATGGGCAACAGATCCTTTGTTTTTAGGGTCATACAGTTATGTTGCTGTTGGATCAAGTGGTGAAGATTTTGATACAATGGCTGAGCCATTGCCTAGAGAAAGCACATCATCACCACCACTTCAGATTTTGTTTGCAGGGGAAGCAACTCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGCCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCACTGCCTTGGGATATATAACAACTAG 1632 0.4455 MVVKKPRIVIVGAGMAGLTAANKLHSVTASKDLFEVCVVEGGSRIGGRINTSEFCGDQIELGATWIHGIGGSPLHKIAQQTHSLLSDKPWECMDGNSSDQTTITIAEGGFHLDPSIVNPITRLFKNLMDHAQGKNQKNNITERDTTARGDEFLHSFCKKVSTRVGSAGLSIGSFLRGGLDAYWDSSKDQEEFKGCGIWNRKLLEEAIFAMHENTQRTYTSAGDLLNLDYNAESEYQMFPGEEITIAKGYLSIIEYLASALPPGVIQLGRKVTRIQWQPERHEQNGFCSSRPVKLHFCDGSVMHADHVIITVSLGVLKAAIGDDQGMFQPPLPNYKAEAISRLGFGVVNKLFMQLSPTTHHCKDGHHRPKRFPYLQLVFHSPHSEMRHKKIPWWMRRSPTLCPIYKNSSVLLCWFAGEEAKALESLKDEEIINGASDTFSSFLCSGYSYNEVQFSKVLKTKWATDPLFLGSYSYVAVGSSGEDFDTMAEPLPRESTSSPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCLGIYNN* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2767 543 SUPERFAMILY FAD/NAD(P)-binding domain 3 535 IPR036188 -
Amo01g2767 543 PANTHER POLYAMINE OXIDASE 5-RELATED 1 539 - -
Amo01g2767 543 Gene3D - 136 479 - -
Amo01g2767 543 PANTHER FLAVIN MONOAMINE OXIDASE 1 539 - -
Amo01g2767 543 Gene3D - 1 109 IPR036188 -
Amo01g2767 543 SUPERFAMILY FAD-linked reductases, C-terminal domain 343 473 - -
Amo01g2767 543 Pfam Flavin containing amine oxidoreductase 15 532 IPR002937 GO:0016491
Amo01g2767 543 Gene3D - 116 530 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2767 Amo-Chr1 98478892 98481362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2767 K12259 - gmx:100783032 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2767 01 98478892 98481362 Amo13g2565 13 47867296 47869688 PCT
Amo13g2565 13 47867296 47869688 Amo01g2767 01 98478892 98481362 PCT