Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2583 ATGGGGAATTGCCAAGCCATTGATACAGCAACACTAGTGATACAGCAACCAAATGGGAAAGTAGAAAGGTTATATTGGCCTGTGAGTGCTAGTGAAGTGATGAAGGGTAACCCTGGTCACTATGTTGCTCTTCTCATCTCTTCCACGACATTGTGCACTTCCAAAGACAACAATAACAATAACCAAATGCCCCAAACAACAATAACAACAACAACCACCCTAGGTTATGAAGGGTCTGTGGGCAAAGAAAAAGCAAAGATGAAGAAAAACTTATTATCAGAATCAGATCAAGTGGTGAAGTTGAAACCTGGGTTTGACATGAACAAGGCAGCAAGGAGCCTTGTTGAGCAGGAGGACAAACAAGAAAGTAATAAAGGTGAAAGACATGGGTCAAGGACAACAACATCAAGTAGTAATGGTGGTAGTGGCACAACAACAGCTAAGTCATCAAGAACATGGCAACCCTCTTTACAAAGCATCTCTGAGGCAACAACCTGA 498 0.4217 MGNCQAIDTATLVIQQPNGKVERLYWPVSASEVMKGNPGHYVALLISSTTLCTSKDNNNNNQMPQTTITTTTTLGYEGSVGKEKAKMKKNLLSESDQVVKLKPGFDMNKAARSLVEQEDKQESNKGERHGSRTTTSSSNGGSGTTTAKSSRTWQPSLQSISEATT* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2583 165 MobiDBLite consensus disorder prediction 100 165 - -
Amo01g2583 165 Pfam PADRE domain 1 162 IPR025322 -
Amo01g2583 165 MobiDBLite consensus disorder prediction 112 129 - -
Amo01g2583 165 PANTHER DUF4228 DOMAIN PROTEIN 77 164 - -
Amo01g2583 165 MobiDBLite consensus disorder prediction 130 165 - -
Amo01g2583 165 PANTHER DUF4228 DOMAIN PROTEIN 1 64 - -
Amo01g2583 165 PANTHER EXPRESSED PROTEIN 1 64 - -
Amo01g2583 165 PANTHER EXPRESSED PROTEIN 77 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2583 Amo-Chr1 91397066 91398276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2583 - - aprc:113847180 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2583 01 91397066 91398276 Amo11g2035 11 110720010 110721881 hybridization