Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2558 ATGCTAATATCACAAGATGAGATATTTGGACCTGTCATGGTGCTTTCTAAGTTCAAGAGCATTGAGGAAAGAATTGAGAAGGCGAATAGCAGCAAATATGGGCTAGCGTCGGGAATTGTGACAAAGAACATGGATATTGCAAACACAGTGTCAAGGTCCATCCGAGCAGGTATTGTTTGGATCAACTGCTTCTTTGCCTTTGATATTGATTGCCCTTTTGGAGGCTACAAGATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTCGATTAG 276 0.4167 MLISQDEIFGPVMVLSKFKSIEERIEKANSSKYGLASGIVTKNMDIANTVSRSIRAGIVWINCFFAFDIDCPFGGYKMSGFGRDYGLEALD* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2558 91 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 90 - -
Amo01g2558 91 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 68 IPR016163 GO:0016620
Amo01g2558 91 SUPERFAMILY ALDH-like 1 90 IPR016161 GO:0016491
Amo01g2558 91 Pfam Aldehyde dehydrogenase family 1 90 IPR015590 GO:0016491
Amo01g2558 91 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 69 90 IPR016162 GO:0016491
Amo01g2558 91 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2558 Amo-Chr1 90267947 90269916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2558 1 91 Aldehyde Dehydrogenase Gene Family AT3G24503 64.835 5.06e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2558 K12355 - gmx:100792798 169.859