Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1927 ATGGCCATGGAGGTGGAGCTTGAACCCATGGCCGCTTCCATCGGCGTCACAGTCCCCGTGCTCCGCTTTCTCCTCTGCTTCGCAGCCACCATTCCTCTCAGCTTCCTGTGGCGCATCGTCCCCGGCCGCCTCCCTAAGCATCTATACTCTGCCGGCGTCGGCGTCTCCCTTTCTTACATTTCCTTCGGTTTGTCTTCCAACATGCACTTCTCGGTCTTGATCATGATTGGTTACTCCTCCATGCTCCTCTTTCGCCCCCGATGCGGCATCCTCACCTTCTTCCTCGGATTCGGTTATCTCATTGGCTGTGAGAGGCAAAAAGGAAAAAAAAGATTTGACTGTTTGTTTATTTGTTTGTGTAGCCATGTGTATTACATGAGTGGAGATGTATGGAAGGATGGTGGCATCGATGACACTGGGGCCTTAATGGTGTTGACCCTGAAGATCATCTCTTGTTTGTTTAATTACAATGATGGATTGTTGAAAGAGGAAGAAGGTTTACGCGAAGCCCAATGGAAATACAGGTTGACGAAGTTACCTTCTCTGGTTGAGTATATTGGTTACTGCCTCTGCTGTGGGAGTCACTTTGCTGGTCCTGTCTTTGAAATGAAGGATTATCTTGATTGGACTGAAGGAAAGGGGATTTGGAGCAAAGAAGCGAAAGGGCCATCACCATCACCATATGGAGCAACCATTCGGGCTCTTATCCAAGCTGGTTTTTGCATGGCCTTGTATTTGTATCTAGTCCCTTATTTTCCTCTGTCCAGGTTTACAGAGCCTATATACCAAGAATGGGCATTCTGGAAAAAGTTTGGTTACCAATATATGTCCGGCTTCACAGCACGTTGGAAGTATTATTTCATTTGGTCAGTTTCAGAAGCTTCTATTATCATCTCTGGTCTTGGTTTCAGTGGTTGGGTGAATTCGTCTCCACCAAAGCCAAGATGGGATCGAGCGAAGAATGTAGATATTTTAGGTGTTGAGTTCGCAAAGAGTTCTGTTATGATTCCAACTGTGTGGAATATTCAAGTTAGCACATGGCTTCGTCATTATGTTTATGAGCGGCTTGTTCAGAGTGGTAAGAAACCCGGATTCTTTCAGTTACTTGCTACACAGACCATTAGTGCTATTTGGCATGGGGTGTATCCTGGATACATCATCTTCTTTGTTCAGTCGGCGTTAATGATTGCTGGTTCAAGAGCCATTTACAGATGGCAGCAAGCGACGGCCCCATCAATGGCAAACGCATTCGTGTTTTTGAATTTTGCTTATACACTTGTCGTTATAAATTACTCTAGCGTCGGTTTCTTGGTGCTAAACCTGCACGAAACTCTTGCCGTGTTCGGAAGTGTGTATTATATTGGAACTATTCTTCCCATTTTAATGATTCTTCTTGGTAATGTAATCAAACCTAGGAGGCCTGGAAGATCCAAAGCTCAAAAAGAGCAATGA 1452 0.4504 MAMEVELEPMAASIGVTVPVLRFLLCFAATIPLSFLWRIVPGRLPKHLYSAGVGVSLSYISFGLSSNMHFSVLIMIGYSSMLLFRPRCGILTFFLGFGYLIGCERQKGKKRFDCLFICLCSHVYYMSGDVWKDGGIDDTGALMVLTLKIISCLFNYNDGLLKEEEGLREAQWKYRLTKLPSLVEYIGYCLCCGSHFAGPVFEMKDYLDWTEGKGIWSKEAKGPSPSPYGATIRALIQAGFCMALYLYLVPYFPLSRFTEPIYQEWAFWKKFGYQYMSGFTARWKYYFIWSVSEASIIISGLGFSGWVNSSPPKPRWDRAKNVDILGVEFAKSSVMIPTVWNIQVSTWLRHYVYERLVQSGKKPGFFQLLATQTISAIWHGVYPGYIIFFVQSALMIAGSRAIYRWQQATAPSMANAFVFLNFAYTLVVINYSSVGFLVLNLHETLAVFGSVYYIGTILPILMILLGNVIKPRRPGRSKAQKEQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1927 483 Pfam MBOAT, membrane-bound O-acyltransferase family 124 434 IPR004299 -
Amo01g1927 483 PANTHER MEMBRANE BOUND O-ACYL TRANSFERASE, MBOAT-RELATED 6 483 - -
Amo01g1927 483 PANTHER PORCUPINE 6 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1927 Amo-Chr1 53721813 53724832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1927 K13519 - gmx:100778962 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g1927 01 53721813 53724832 Amo11g1514 11 62113950 62117103 hybridization