Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1678 ATGGATTCTTTTACTTCGTTCTTCGATTCTTCCCGAACCCGCTGGAGCTACGATGCTCTCAAGAACTTCCATCAGATCTCTCCCGTAGTTCAGAATCATCTCAAGCAGGTTTATTTTACGCTATGTTGCGCTGTGGTTGCTTCAGCTGTTGGTGCTTACCTTCATGTGCTGTGGAATATTGGAGGTCTACTCACTGCTTTGGCTTCCATTGGAAGCTATGTGTGGTTGATGTCCACACCTCCTTTTGAAGAGCAAAAGAGGGTTACTTTGTTGATGGTTTCGGCCCTGTTTCAAGGTGCCTACATTGGACCTCTTATTGATCTGGCTATTCAAGTTGAACCAAGCCTTATCTTTACTGCGTTTGTGGGAACTTCCTTGGCCTTCGCATGTTTCTCAGCGGCAGCTTTGGTTGCAAAGCGTAGGGAGTACCTCTACCTTGGCGGCATGCTTTCTTCTGGGTTGTCTCTTCTTATGTGGCTGCATTTCGCTTCCTCCATCTTTGGTGGTTCGATAGCACTTTTTAAGTTTGAGTTGTATTTTGGACTCTTGGTATTTGTGGGTTACGTGATCGTAGATACCCAAGAAATAATTGAGAGGGCACACTTTGGTGATCTAGATTATGTGAAGCATGCCATGACTCTGTTTACTGATTTGGCTGCAATCTTTGTGCGGATTCTTGTTATAATGTTGAAGAATTCGGTTGAGAAAAATGAGAAAAAGAACAAGAGGAGAGAGTGA 738 0.4404 MDSFTSFFDSSRTRWSYDALKNFHQISPVVQNHLKQVYFTLCCAVVASAVGAYLHVLWNIGGLLTALASIGSYVWLMSTPPFEEQKRVTLLMVSALFQGAYIGPLIDLAIQVEPSLIFTAFVGTSLAFACFSAAALVAKRREYLYLGGMLSSGLSLLMWLHFASSIFGGSIALFKFELYFGLLVFVGYVIVDTQEIIERAHFGDLDYVKHAMTLFTDLAAIFVRILVIMLKNSVEKNEKKNKRRE* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1678 245 Pfam Inhibitor of apoptosis-promoting Bax1 31 229 IPR006214 -
Amo01g1678 245 PANTHER BAX INHIBITOR-RELATED 2 244 IPR006214 -
Amo01g1678 245 Coils Coil 232 245 - -
Amo01g1678 245 CDD BI-1 23 233 - -
Amo01g1678 245 PANTHER BNAANNG07130D PROTEIN 2 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1678 Amo-Chr1 38860430 38863523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1678 K21889 - gmx:100795508 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g1678 01 38860430 38863523 Amo11g1210 11 40564186 40567202 hybridization
Amo05g0418 05 4824341 4826569 Amo01g1678 01 38860430 38863523 PCT
Amo01g1678 01 38860430 38863523 Amo05g0418 05 4824341 4826569 PCT