Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0669 ATGTGGGGTAGGTGTTGGTGTTCTGGTGGTGCAGTTTTTGGATCTTTGAGGAAAAGGGTATCTTCAATTGTTAATATAAGTGATGGGTATGTGAAAAAGCTTGGTCCTTTTGATCCTTATTTGTTGGGTTTGAAGGGTGTGGTTATGGGTGCTGTGGAAAGAAGAGGGGCATCTTTATCGATTGTTGTTCTGAACCAGATCAAGAATAGAGGTATATCTTCTTCAAAATTGGTTAAATCTTCTGATCAGAGGTTCTTTTCCAACAACAGCAGCAAAAATTCTTGTGGTGATGGTGATGATAACGGTGGTGTTACTGTTAGCAATGGTGGAACACAAGAATTCATATCATACTCTGAAGCAAAGAAGCTATTGAGATTGGTGAATGTGGAGACACTGAAGATGAGACTTGGAATGGAAGGGAAGGAAGTTATTCCTTACACTGAACTTCTCGAAGCTTGTGAGAGCACTGGTATTGCTAGGAGTAAAGAGGAAGCTATAGCATTCTCCAAGGTTCTTGATGAAGCTGGTGTTATTCTCCTTTTCAGAGATAAGGTGTATCTCCACCCTGATAAGGTGGTGGATCTGGTTCGAAGGGCTGTTCCGCTAGCACTGACTGCAGACGACGATCCTGTGAGGGAGGAGATAAAGAAGCTGCAGGAGAAAAAAGAGGAAATTGATATTTTGGCCCACAAGCAGGTTCGGCGCATCCTTTGGTCCGGACTAGGATTCGGTGTAGTTACTGTTGGCTTATTCTTTCGGCTAACATTCTGGGAATTTTCCTGGGACGTAATGGAACCTATCGCCTTCTTTACAACGACAACAGGTTTAGTCATAGGTTACGCCTACTTTCTATTCACTTCAAGAGACCCAACTTACCAAGACTTAATGAAGAGGCTCTTCCTCTCAAGACAGAGGAAGCTTTTCAAGCGGTATAACTTCGACGTTGAGAGATTCAAGGAGCTCCAGTGCAAGTGCAGAACACCATTAGATGCTAACACTGTTTTGAAGAATCGCATAGGGGTGCATCTTGATCTCGACGATGCTATACATAGAGATTGA 1059 0.4297 MWGRCWCSGGAVFGSLRKRVSSIVNISDGYVKKLGPFDPYLLGLKGVVMGAVERRGASLSIVVLNQIKNRGISSSKLVKSSDQRFFSNNSSKNSCGDGDDNGGVTVSNGGTQEFISYSEAKKLLRLVNVETLKMRLGMEGKEVIPYTELLEACESTGIARSKEEAIAFSKVLDEAGVILLFRDKVYLHPDKVVDLVRRAVPLALTADDDPVREEIKKLQEKKEEIDILAHKQVRRILWSGLGFGVVTVGLFFRLTFWEFSWDVMEPIAFFTTTTGLVIGYAYFLFTSRDPTYQDLMKRLFLSRQRKLFKRYNFDVERFKELQCKCRTPLDANTVLKNRIGVHLDLDDAIHRD* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0669 352 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 113 334 IPR039055 GO:0051560
Amo01g0669 352 Coils Coil 211 231 - -
Amo01g0669 352 Pfam Mitochondrial calcium uniporter 163 321 IPR006769 -
Amo01g0669 352 PANTHER CALCIUM UNIPORTER PROTEIN 6, MITOCHONDRIAL 113 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0669 Amo-Chr1 9658126 9660693 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0669 K20858 - gmx:100784357 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0669 01 9658126 9660693 Amo17g0655 17 14124386 14127895 PCT
Amo17g0655 17 14124386 14127895 Amo01g0669 01 9658126 9660693 PCT