Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0314 ATGGGTGAGGAAGAACCTGTGACTGAAGTTTCCAAAGCAGATTCAAATGGCAACAGTTTGTTGGAGAAAACTTTAAATGAAGGGGCAGAAAATAAGGACTTGGGAACTGATGGAGGAAATGTCTTGGAGAATAATGGAGTAAAAAAGTTGAAAGGGGCTGAAATAAATGGAGCTAATGAAGAGAAGAGAGCTGATGGTGTGGAAGAGATTGAAGGAGATAAAAAAGTTGGTAGTGCAGAAGAAGCAAAAGATGACAAGAAAATTGAAGAAGCAAAGGATGACAAGAAAGTTGAAGATGTGAAAGAAGTAAAAAAGGACAAGAAAGATGATGATGTGGAAGAAGAAAACGAGGACAAGAAAGATGATGGTGCAGAAGTCAAAGAGGATAAGGAAGTTAACAGTGTCGAAGAAGTAAAGGAAAATAAGGAAGTTGTTAGTGTGGAAGAAGGAAAGGAGGATAAGGAAATTGATGGTGTGAAAGAAGTATCAGAGGTTAAGAAAGATGATGATGGACTTAAACCTGAGAATGAGAAAACAGATGCAGATGAGGTCAAGGAAAGTAAAGAAGAAAAGGAAAAGGTTGAAGCTGAAAAACCAGAAGTGGATGCAATGGAAGTAGATGGTAACACTAAAGACATGCAGGAGAGTGGGGAAAAGGAAGACAAGGAGAAAATTGAAGCAGAGCTGGACGGCAACAAGGAAGAGGAGGATGAGGATGTGGATAATGCTGGAAAGTCAAAAGAAGAAGACAAAGCTGAAGATAACAAGGATAATAAAGGATCGAAAAAGCGTTCGAGAGGGAAGGTCAATGGGGAGAAAGTGAAAGAGAAAAAGAAGGAATTGACGAAGATAGAGCCAAGGACTCCAACTGTTGATCGTCCTGTTCGAGAGAGGAAATCTGTTGAGAGGTTGGTAGCATCAATAGAGAAAGATGCAAACAAAGAATTCCACATTGAAAAGGGTCGTGGTACACCTTTAAAAGATATACCCAATGTGGCATTTAAATTATCTAGAAGGAAGACTGATGATACTTTCAAGTTGCTCCATACAATTCTCTTTGGAAGGAGAGGGAAGGCAGTTCAAATCAAGAGTAATATATCAAGGTTTTCTGGTTTTGTGTGGCATGACAACGAGGAAAAGCATATGATCAAAGTTAAGGAAAAATTTGACAAGTGTAACAAAGAAAAACTACTGGAATTTTGTGATGTGCTTGACATAGCAATTGCCAAGGCAACAACAAGGAAGGAAGATATTATTTCCAAGTTGATTGACTTCTTAGTTGCTCCTCATGCAACCACAACTGTGCTACTTGCAGAAAAAGAAAAGGGAAGAAAGCGCAAGCGTGTTGTGAAACGAGGTACTTCAAGGTCTGGGATAACAACTTCAAGACGTTCTACTAAGAGTCGGAAGAAAAATGAAGATTCTTCACCAGCAGAGGAAACAAGGAGTGACACAGAAAATGAGTCTGAGGATGAAGAGAAAGACAAAGAAAATGAGGAGGAAAATGAAAATGGTGTTCATGACAAATCTGAGGATGAAACGCCAGAGAAATCTGAAAGTGAGGATGAAAGTGATTCTGCAAGTGAATCTGAAGATGATAAAAAAAGGAAACAAAATTCAAAAGCATCATCCACGAAGAAAGAATCTGCTACAAAAGGTAAAACTGAGAGCGTTACAGTTACGAAAAAATCTCGGTCAACACCAAAGAGGACACCTAAGAAATCATCAGCCACCACTACCAAGGTTGATGATGAGGGCGATGAAAGTCCAAAGGTCTTTTCAAGAAAGAAGCAAAATGATAAGGCTGGAAAGCAGAAGACATCAACTCCATCCAAGTCTGCTTCCAAAGAGAAAACAGAAAAAGTTACCAAAGGAAAGGGCAAGAAGAATCAGAAAAAGATCCCCACTGATGATCAGCTGCGCAATTCAATTTGTGAAATTCTTAAAGAAGTTGATTTCAATACGGCCACATTTACTGATATTCTGAAGCAACTTGCCACACGTTTTGATTTGGATCTCACACCGAGAAAGGCATCTATAAAGATCATGATTCAAGAGGAGCTGACAAAGCTAGCTGATGAAGCAGACGAAGAAGATGAAGAGGATGCTGAGAAAGGGGAAACCCAACCTACTGGCCAGGAAGTTGAAACCTGA 2154 0.3946 MGEEEPVTEVSKADSNGNSLLEKTLNEGAENKDLGTDGGNVLENNGVKKLKGAEINGANEEKRADGVEEIEGDKKVGSAEEAKDDKKIEEAKDDKKVEDVKEVKKDKKDDDVEEENEDKKDDGAEVKEDKEVNSVEEVKENKEVVSVEEGKEDKEIDGVKEVSEVKKDDDGLKPENEKTDADEVKESKEEKEKVEAEKPEVDAMEVDGNTKDMQESGEKEDKEKIEAELDGNKEEEDEDVDNAGKSKEEDKAEDNKDNKGSKKRSRGKVNGEKVKEKKKELTKIEPRTPTVDRPVRERKSVERLVASIEKDANKEFHIEKGRGTPLKDIPNVAFKLSRRKTDDTFKLLHTILFGRRGKAVQIKSNISRFSGFVWHDNEEKHMIKVKEKFDKCNKEKLLEFCDVLDIAIAKATTRKEDIISKLIDFLVAPHATTTVLLAEKEKGRKRKRVVKRGTSRSGITTSRRSTKSRKKNEDSSPAEETRSDTENESEDEEKDKENEEENENGVHDKSEDETPEKSESEDESDSASESEDDKKRKQNSKASSTKKESATKGKTESVTVTKKSRSTPKRTPKKSSATTTKVDDEGDESPKVFSRKKQNDKAGKQKTSTPSKSASKEKTEKVTKGKGKKNQKKIPTDDQLRNSICEILKEVDFNTATFTDILKQLATRFDLDLTPRKASIKIMIQEELTKLADEADEEDEEDAEKGETQPTGQEVET* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0314 717 MobiDBLite consensus disorder prediction 54 229 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 484 499 - -
Amo01g0314 717 SUPERFAMILY DEK C-terminal domain 629 688 - -
Amo01g0314 717 Coils Coil 681 701 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 691 717 - -
Amo01g0314 717 PANTHER DEK PROTEIN 175 703 IPR044198 GO:0003677|GO:0006325
Amo01g0314 717 PANTHER PROTEIN DEK 175 703 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 438 635 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 466 483 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 238 288 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 529 553 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 11 25 - -
Amo01g0314 717 Pfam DEK C terminal domain 635 688 IPR014876 -
Amo01g0314 717 Coils Coil 482 502 - -
Amo01g0314 717 Gene3D - 627 690 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 1 288 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 500 514 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 611 635 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 554 575 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 691 705 - -
Amo01g0314 717 Coils Coil 177 197 - -
Amo01g0314 717 MobiDBLite consensus disorder prediction 576 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0314 Amo-Chr1 5052411 5060551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0314 K17046 - gmx:100818537 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0351 11 5541115 5549307 Amo01g0314 01 5052411 5060551 hybridization