Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0191 ATGGAAAAAGTGAGGAGAGCAGCGAATGAGATAGCTTACGCTCGCAACCCTCGTAAGCTCTGTCGTCTTCACCGCTCTCTCATCCCTCTCCTTTCCATTTCCTCCTCTCTCTACAAACTCTCTCTCTCACTTCGCCACTCTCTCTACCGACACGGCTTCTTCCCAGTCCACCGTTTGCCAGTTGCTGTTGTTAGCGTTGGGAATTTGAGCTGGGGAGGAAATGGGAAGACGCCCATGGTTGAGTTTATAGCTCGCTGGTTGTGTCATGTTGGAATTTCACCTCTCATTCTTTCAAGGGGTTATGCAGGTGGTGATGAAGTCAACATGCTTCGTAGGCATTTAATTTGGACACCAACTAAGTTTGGTGTTGGCGCAAATCGAGCTGCGGTTGCAAGTCAATTCATCCAAAGATATGGCTATGTTGATACCAGAGAGAGTTCATGGTATAGGAAACAGCAGCTGGGTCATGAGTTGAATGTTTCTGTTGATTCAGAAAATATTGGTGCTGTAGTTCTTGATGATGCAATGCAGCACTGGAGTTTGTGGCGTGATTTGGATATTGTAATGGTTAATGGATTGACTCTTTGGGGCAACCTTCAGCTTTTGCCACTTGGACCTTTGAGGGAACCCTTGACTGCACTTAAACGAGCAGATGCAGTTGTAATCCATCATGCAGACCTGGTGTCTGAGAATATTCTCAAGGATATTGAGTCAACAATCCGAGGAATCAAAGAGTCGATTCCACTTTTCTTAACAAAAATGGATCCAACTTACTTATTTGAGGTGGGTAATACCAATGCCAATATACCGTTGACAGCTCTCCATAAAGCTACTATATTATGTGTTTCGGCTATTGGTTCCGCAGAATCTTTTGTGAAGAAAATTCAGAAGATGGGTGCACGTTATGTGGATCGAGTAGATTTCAGTGATCATCATGCATTCCATGTCAAGGATATTGAGTTGATCAGAGCCAAGCTAAGAGAATTAGAGGGCAAGTTTGGTTCCAAGCCCATAGTTGTTATTACTGAAAAGGATTATGATAGGGACCCGGAGATTCTCAAACAGCTGTATCCATTTAAAACTTTTGTTCTGTGTTCTGCATTGATGGTTATGTCCTATAAAGGAAGCACAGAGGATAGCTTTAAGAATTTTCTAAAGGACCACTTGAGATTAAAATTTCCTGCAGAAAATTAG 1194 0.428 MEKVRRAANEIAYARNPRKLCRLHRSLIPLLSISSSLYKLSLSLRHSLYRHGFFPVHRLPVAVVSVGNLSWGGNGKTPMVEFIARWLCHVGISPLILSRGYAGGDEVNMLRRHLIWTPTKFGVGANRAAVASQFIQRYGYVDTRESSWYRKQQLGHELNVSVDSENIGAVVLDDAMQHWSLWRDLDIVMVNGLTLWGNLQLLPLGPLREPLTALKRADAVVIHHADLVSENILKDIESTIRGIKESIPLFLTKMDPTYLFEVGNTNANIPLTALHKATILCVSAIGSAESFVKKIQKMGARYVDRVDFSDHHAFHVKDIELIRAKLRELEGKFGSKPIVVITEKDYDRDPEILKQLYPFKTFVLCSALMVMSYKGSTEDSFKNFLKDHLRLKFPAEN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0191 397 Hamap Tetraacyldisaccharide 4'-kinase [lpxK]. 7 394 IPR003758 GO:0005524|GO:0009029|GO:0009245
Amo01g0191 397 Pfam Tetraacyldisaccharide-1-P 4'-kinase 29 386 IPR003758 GO:0005524|GO:0009029|GO:0009245
Amo01g0191 397 TIGRFAM lpxK: tetraacyldisaccharide 4'-kinase 37 346 IPR003758 GO:0005524|GO:0009029|GO:0009245
Amo01g0191 397 PANTHER TETRAACYLDISACCHARIDE 4'-KINASE 1 390 IPR003758 GO:0005524|GO:0009029|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0191 Amo-Chr1 3264222 3268625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0191 K00912 - gmx:100789612 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0530 11 9248070 9250483 Amo01g0191 01 3264222 3268625 hybridization