Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo01g0190 | ATGGGTCAGATCGGGAGGAGGAAGAAGAAGGGAAGGCCATCGAAGGCGGATCTGGCACGGCGCTCCGGAGAGTCTCAAGCGGCGGAGAAATCCGATATCCGGCGAAGTCTCCGGCGCCGGAATGTGAGGTACAACATCATTGACTACGATGACGATTACCTTGACGAGGATGAGGACGAGAGGAGGCGCGARAAGAAGAAGCTGAARCTCGTTGACAAGCTCAACAGTGACGAMGARGAAGAAGAAGAAGAAGMAGMAGCAGCTCGAGGGGAAGGTGAAGATGACGCAGAAGAAGAAGAGGAYGCGCGTGCCGATTCGCGTGCTGAACACGCGCTTGAAGAAGATGAAGAAGGAGGAGACGTTGACGAAATTGAAGGAGGAGAAGAGAACGAGGACGCAGAAGACGAAGAAGAAATGGTAAAAGGCAGAAAAGTGGATTTGAAAGGGCTCCACTGTGCTTCAGGAACTCCAACGAATCCTCCATCTGGGATTCCACTGCCGGATAAGAGGACTCTGGAATTGATCCTTGACAAGCTTCAAAAGAAGGACACTTACGGTGTGTTCGCAGAACCAGTTGATCCAGAAGAGGTGTGTGAAATTTTCTTCCTTTGA | 612 | 0.5049 | MGQIGRRKKKGRPSKADLARRSGESQAAEKSDIRRSLRRRNVRYNIIDYDDDYLDEDEDERRREKKKLKLVDKLNSDXEEEEEEXXAARGEGEDDAEEEEDARADSRAEHALEEDEEGGDVDEIEGGEENEDAEDEEEMVKGRKVDLKGLHCASGTPTNPPSGIPLPDKRTLELILDKLQKKDTYGVFAEPVDPEEVCEIFFL* | 204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo01g0190 | 203 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Amo01g0190 | 203 | PANTHER | BROMODOMAIN CONTAINING PROTEIN | 1 | 197 | - | - | |
| Amo01g0190 | 203 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Amo01g0190 | 203 | MobiDBLite | consensus disorder prediction | 77 | 102 | - | - | |
| Amo01g0190 | 203 | Coils | Coil | 87 | 116 | - | - | |
| Amo01g0190 | 203 | MobiDBLite | consensus disorder prediction | 58 | 76 | - | - | |
| Amo01g0190 | 203 | MobiDBLite | consensus disorder prediction | 16 | 35 | - | - | |
| Amo01g0190 | 203 | MobiDBLite | consensus disorder prediction | 48 | 169 | - | - | |
| Amo01g0190 | 203 | PANTHER | DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN | 1 | 197 | - | - | |
| Amo01g0190 | 203 | Coils | Coil | 79 | 84 | - | - | |
| Amo01g0190 | 203 | Coils | Coil | 64 | 77 | - | - | |
| Amo01g0190 | 203 | MobiDBLite | consensus disorder prediction | 115 | 136 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo01g0190 | Amo-Chr1 | 3254361 | 3255659 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo01g0190 | K22184 | - | jre:108993865 | 152.91 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo11g0531 | 11 | 9280643 | 9286889 | Amo01g0190 | 01 | 3254361 | 3255659 | hybridization |