Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1631 ATGAGTAGGGACGGATGGGAGAGGGTGGTGACGCGGACGAAGCAGCGAGCGGCTCAGTGGATAGTGGTGAGAGAAGTTTCGTGGAAGGACGCTTTCACCAAACAGAACATCCCTATCTCTATCAAATTATCAATCACACCCAATATTTTTTTCAGCAAACTACCTCTTCCACTTCATCGCCCACTGATTCTCCCTCTTCCTTTTCTCTTATGCTCTCTCTCAACTGTAAAAGGTGCAGAATCTCGGTTGAATTTAGAGGGGATGGGTGGATCCATTTCAAAATGGCGTAGGGGGAGACAGCATTCGTATTCGAGGACTAGTTCACATTCTTGTAGTTACCCCCCGCCTCAACCACCCTACGTGCTAGAACGCCATCATTTGCCTCAGGAATATTACGGGACTCCATCTCAAACCTATGGTGGTGGTCGTGCACCTGAATCAAAAAAGAGGTTGGAGAGGAAGTATTCAAAGATAGATGATAACTATGTTAGCTTGGACCAGGTAACCGAGGCTCTGGCAGGTGCTGGTTTAGAGTCTTCCAATCTAATTGTTGGTATTGACTTCACAAAGAGCAATGAGTGGACAGGTGCAAGATCATTCCAAAGGAGAAGTCTGCATCATATTGGTCATGAACAAAATCCGTATGAACAAGCAATATCAATCATTGGAAAAACATTGTCTTCCTTTGATGAGGATAACTTAATTCCCTGTTTTGGATTTGGAGATGCATCAACCCATGACCAGGAAGTTTTTAGTTTTTATCCGGAAGAGAGATTTTGTCAAGGGTTTGAAGAAGTGTTGAGACGGTACCGGGAACTGGTTCCTGAATTAAAGCTTGCAGGGCCAACATCATTTGCCCCAGTCATTGAAATGGCAATCACTATAGTTGAGCAAAGTGGTGGCCAATACCATGTCTTATTGATAATAGCAGACGGACAGGTGACAAGAAGTGTTGATACTGAGAGAGGGCAGCTAAGCACTCAGGAAAAACAAACTGTTGAAGCTATCGTGAAAGCAAGTGAATATCCCCTGTCAATCATATTAGTTGGAGTTGGAGATGGGCCATGGGACATGATGAAAGAATTTGATGATAACATACCGGCCCGGGTCTTTGACAATTTCCAGTTTGTGAATTTTACTGAAATAATGTCAAAGAACATGGATCGATCCAGAAAAGAAACAGAATTTGCACTTGCTGCGCTGATGGAAATACCCTCTCAGTACAAGGCAACATTGGAACTTAATATACTGGGTGCTCGTAGAGGGAAAGCTATAGACAGGGTTCCTCTTCCTCCCCCTCTGTATGGTGCTGCTGTATCTCTGAACGCCCCCGCCCCCGCCCCCGCCCCCGCCCCAAAAGCTTCCCGTTCAGCCAGTTTTCATCCTAGTGCACCATCTGACAGTGACAGACATCATAATACCGGCGCAAATCGTCCTGCAAGTTCTGCTTCTGATGATCATGTTTGTCCAATTTGCCTCTGTGAACCTAAGAATATGGCCTTTGGTTGCGGACATCAGACTTGCTGTGAGTGCGGTCAGGATCTGGAGACGTGCCCCATTTGCAGAAGTACCATCGTTACTCGAATAAGACTTTATTAG 1599 0.454 MSRDGWERVVTRTKQRAAQWIVVREVSWKDAFTKQNIPISIKLSITPNIFFSKLPLPLHRPLILPLPFLLCSLSTVKGAESRLNLEGMGGSISKWRRGRQHSYSRTSSHSCSYPPPQPPYVLERHHLPQEYYGTPSQTYGGGRAPESKKRLERKYSKIDDNYVSLDQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPEERFCQGFEEVLRRYRELVPELKLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSTQEKQTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARVFDNFQFVNFTEIMSKNMDRSRKETEFALAALMEIPSQYKATLELNILGARRGKAIDRVPLPPPLYGAAVSLNAPAPAPAPAPKASRSASFHPSAPSDSDRHHNTGANRPASSASDDHVCPICLCEPKNMAFGCGHQTCCECGQDLETCPICRSTIVTRIRLY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1631 532 ProSiteProfiles Zinc finger RING-type profile. 489 522 IPR001841 -
Alju13g1631 532 SMART VWA_4 179 382 IPR002035 -
Alju13g1631 532 CDD vWA_copine_like 158 408 IPR010734 -
Alju13g1631 532 MobiDBLite consensus disorder prediction 446 485 - -
Alju13g1631 532 SUPERFAMILY vWA-like 181 363 IPR036465 -
Alju13g1631 532 PANTHER COPINE FAMILY PROTEIN 1 109 509 - -
Alju13g1631 532 Pfam Copine 204 417 IPR010734 -
Alju13g1631 532 SUPERFAMILY RING/U-box 483 528 - -
Alju13g1631 532 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 465 532 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1631 Alju-ChrAlju13 34525633 34530331 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1631 13 34525633 34530331 Alju13g1631 13 34525633 34530331 ECH