Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1603 ATGGATATGAAGGGATATTCAGGTTTGAGGACAAATCATAGGAATGAAGCATTTGTTTCAGGTTATCAACAACACAGCAGAAGAAGACGACAACCACAATGCATACAAGAAAATCATCACCATCATGTTGCCTCACAACAAACAACAAGCCCACCGAATCATTCTCTGAAATTGGCTTCTTCTTCTTCTTCTTCCCAAAATACAAGCCTACCTCTGTTTCTTCCTGCTTTTGTTGCTTTCCTTCTGCTTCTTTCTTTTATCTCTCCTGTTCTCTCTCACTCTTCACCAACCAATCAAACTTTCCGACCTGGTCCTGAGTTGCTCAAGCTTAGGAGAATTAGAGCTCTCCTTAACAGAATCAACAAGCCTTCTCTCAAGACAATTCAGAGCCCTGATGGGGATTTGATAGATTGTGTTTTATCGCATCAGCAGCCAGCTTTTGACCATCCTGAGCTTAAAGGGAAGAAGCCATTGGATCCACCAGAAAGGCCAAAGGGCCACAAAGACAATGGGGAAGAAGTGATAGAGAGCTTTCAGCTATGGAGTGATTCAGGGGAAACATGCCCAGAAGGAACAGTTCCTATCAGAAGAACAACAGAACAAGACATCCTAAGAGCAAGTTCCGTTCGCAGATTCGGAAGAAAACCAAGAAGAGTACGAAGAGACTCAACTGGCTCTGGTCATGAGCATGCAGTGGTTTTTGTGAACGGAGATCAATATTATGGAGCAAAAGCAGGCATCAACGTGTGGACACCTAAAGTAACTGATGAATACGAATTTAGCTTATCACAAATATGGGTCATTGCTGGCTCTTTTGGTCATGATTTGAACACCGTCGAAGCTGGTTGGCAGGTAAGCCCAGAACTGTATGGGGACAACTATCCTAGGTTCTTCACTTATTGGACTACAGATGCATATCAAGCCACTGGATGCTACAACTTGCTATGTTCAGGTTTTGTGCAGACCAACAATAGAATAGCCATAGGAGCAGCAATATCTCCAAGATCAGCTTATAATGGAAGACAATTTGATATTGCCTTAATGGTTTGGAAGGATCCGAAACACGGGCACTGGTGGCTGGAGTTCGGGTCGGGTCTACTGGTGGGATACTGGCCGGCGTATTTATTCAGTCACCTGAGAAGCCACGCGAGCATGGTGCAATTCGGAGGAGAAATAGTGAACTCGCGATCGAGAGGCTACCACACCGGAACTCAGATGGGAAGCGGACATTTCGCCGGAGAAGGCTTCAGAAAAGCGGCATATTTCAGGAATTTACAGGTCGTCGATTGGGACAACAATTTGCTTCCTCTCACCAACATTCACCAGCTCGCCGATCATCCCAATTGCTACGATATCAGACAAGGCCGTAACAATGTTTGGGGCACTTATTTCTATTACGGCGGCCCCGGCAGAAATATCCGATGCCCCTGA 1431 0.4535 MDMKGYSGLRTNHRNEAFVSGYQQHSRRRRQPQCIQENHHHHVASQQTTSPPNHSLKLASSSSSSQNTSLPLFLPAFVAFLLLLSFISPVLSHSSPTNQTFRPGPELLKLRRIRALLNRINKPSLKTIQSPDGDLIDCVLSHQQPAFDHPELKGKKPLDPPERPKGHKDNGEEVIESFQLWSDSGETCPEGTVPIRRTTEQDILRASSVRRFGRKPRRVRRDSTGSGHEHAVVFVNGDQYYGAKAGINVWTPKVTDEYEFSLSQIWVIAGSFGHDLNTVEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSAYNGRQFDIALMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAGEGFRKAAYFRNLQVVDWDNNLLPLTNIHQLADHPNCYDIRQGRNNVWGTYFYYGGPGRNIRCP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1603 476 Gene3D - 251 363 - -
Alju13g1603 476 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 113 472 - -
Alju13g1603 476 MobiDBLite consensus disorder prediction 38 62 - -
Alju13g1603 476 MobiDBLite consensus disorder prediction 13 29 - -
Alju13g1603 476 FunFam Putative carboxyl-terminal proteinase 249 368 - -
Alju13g1603 476 MobiDBLite consensus disorder prediction 148 169 - -
Alju13g1603 476 Pfam Neprosin activation peptide 127 233 IPR025521 -
Alju13g1603 476 Pfam Neprosin 258 469 IPR004314 -
Alju13g1603 476 MobiDBLite consensus disorder prediction 146 169 - -
Alju13g1603 476 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1603 Alju-ChrAlju13 34291605 34294545 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2529 06 52305388 52308696 Alju13g1603 13 34291605 34294545 CCT
Alju06g2529 06 52305388 52308696 Alju13g1603 13 34291605 34294545 ECH
Alju13g1603 13 34291605 34294545 Alju13g1603 13 34291605 34294545 ECH