Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1595 ATGGACAAATCTTACTGGACATTGTTCACCCATGTTCTTTTGTTGTGCTTGAATCCTGAGAAACTAAGCAAATTTAGAGTGGAGGGTTATATCACAGAGCTATCACTGAAAGCTACTGGTAATTTCTGTATTAATGAGAATGAGATGAGGTGCTTTTGTCTTCATGTATTTGAGCTTTTTCACTTGTCTCTGCATCATTCCCCTATTTTCCTTTCCTTCATTAACCTTTTATTCCTTGTTCTATCACCACTTTCATTTTCTGTCTTAAAAATCTTCTCTTCCCTCTTCCTTCTGCATGGAATTGTACTCTCAAATTATCACCATTCCTGGTTCTTCATCATGAAGAAGCGTATGTTAGTCAGAAAGTCTACAATGGGTAGCCTTTGGATATGCCATTTCTTTCTGTTTCTGACCTTGCTTAATGCTTCTTTCTTCACAGTGGTTCTTGGAGATAATGTCGCAGATTCTTACTGGCTTCTTAAAATGAAATCAAAACTTGTTGACCCATTGGGAGCTCTAAAAGATTGGTCTCCAATTGTTCCTATGTGTAGCTGGTATGGAGTAACATGTTCACTTGATCAGTCTCATGTTATTGGCCTGAACTTGTCTGGTTCAGGAATATCTGGTTCCATGTCAATTGAGCTCATCACCCACCTCACTTATCTTCAAACACTTGATTTGTCTTCAAATTCCCTCACAGGTTCTATTCCTTCTGAGATTGGGGTGCTACAGAATCTAAGAATACTTCAACTTTTCGCGAATTATCTATCTGGCACTATTCCTGCAGAGATAGGTAATTTGAAGAAATTGGAGATTCTCAGAATAGGTGACAACTTTTTGGCAGGTGAAATCACACCAAGTATAGGTAACTTGAAAGAGTTGGAGGAGTTGGGTTTAGCTTTCTGCTATTTTAATGGAAGCATACCTACTGAGATTGGAAGCTTGAAGAATCTAGTTTCTCTTGATTTGCAGATGAACAGTCTAGAGGGTCACATACCCAAAGAAATTCAAGGCTGTGAAAAGCTGCAAAATTTTGCAGCATCAAACAACTTGCTTGAAGGAGACATACCTTCTTCTTTAGGGTCTCTTGTATCATTGCAAATTCTGAACCTAGCCAATAATAGTCTCTCTGGGCCAATTCCCTCTAGCTTGACCCATCTCTCCAAGTTGAAATACCTGAATTTGCTTGGAAACAAACTAAGTGGGAAAGTTCCTTCAGAACTTAACAGTTTGACTCAGCTTCAGAAGCTAGACTTGTCCAAAAACAACCTTTCTGGACCAATAAACCTCTTTAATTCCAAACTAGAGAGTCTCCAAACTCTGGTTCTGTCTGATAATTTTCTCACAGGTAATATCCCTGCCAACTTCTGCTTCAGTGGTTCCAAACTTGAGCAACTTTTCTTAGCTCGGAATAAACTCTCTGGTAACTTCCCCTTGGAGTTACTCAGTTGCTCCTCACTTCAACAATTGGACCTTTCTGATAACAGATTTGAAGGTGAACTTCCAACAACCTTGGACAAACTTCAGAATCTCAAAGATCTTGCTCTCAACAACAACAGCTTCACAGGATCTCTACCTCCTGAAATTGGAAACATTAGTACCTTGGAGGGCCTCTTCTTGTTTCACAACACGTTCACAGGAAAAATTCCAGTGGAGTTTGGAAGGCTTCAGAGGTTGAAAACCATATACCTTTATGATAACCAGATCTCAGGTCCAATACCAAGAGAGATAACAAACTGCACAAGCTTAAGGGAAATTGACTTCTTTGGGAACTTTTTCTCTGGGCCCATTCCAGAGACCATAGGTAAGCTCAAGGACTTGGTTCTGCTTCATCTAAGGCAGAATGACTTGTGGGGTCCTATACCTCCAAGTATGGGGTACTGTAAAAGTCTTCAGTTATTGGCATTAGCAGATAATAAATTGTCTGGTTCTATACCACCCACATTTGGTTACCTTTCAGAGCTTAGAACCATTACCCTTTACAATAACTCTTTTGAAGGACCACTTTCAGAGTCACTCTTTCTTCTCAAAAACCTCAAAATAATAAATTTTTCTCATAACAGGTTCAGTGGAACCATCCTTCCTCTCACTGGTTCACATTCTCTGAATGCTTTGGACTTGACTAACAATAGCTTCTCTGGTCCCATCCCATCAAGCCTAGCCATGTCAAGAAATCTCAGCCGTCTAAGACTAGCGCATAACCAACTCACAGGAAGCATTCCATCTGAATTTGGTCAGCTCATTGAACTCAACTTCTTTGATCTGTCTTTTAACAATTTGACCGGAGAGGTAGCACCTGAACTCTCAAACTGTAAAAAGATCCAACACTTTCTACTCAGTAATAACAGATTGAGAGGGAAAATGCCTTCTTGGCTGGGAAGTTTCCAAGAACTTGGTGAGCTGGACCTCTCATTCAATGACCTCCATGGAAGCGTACCGTCTGAGCTTGGAAACTGTTCAAATTTGCTGAAGCTTTCTCTGCATCACAACAATCTCTCTGGTGAAATACCACAAGAGATTGGAAATCTTACTTCCCTCAATGTCCTTAACTTGCAAAGCAATCATTTCTCAGGCCTCATTCCTTCATCAATTCAGCAATGCAAGAAGCTATATGAACTCAGGCTCTCAGAAAACCTCTTCACAGGCGATATACCAGGCCAGCTAGGAGGACTTACAGAACTCCAAGTGATATTGGACTTGAGCAAAAACCTCTTATCTGGGAAAATCCCATCTTCACTGGGAAACCTCATGAAGCTAGAAAGACTCAATCTTTCTTTCAATAATCTTCAAGGACAAGTTCCTTCTTCTCTTGGGAAACTAACAAGCATTCACATGCTGAATATCTCGTATAACCATCTACAAGCCCAGATTCCTTCAACATTCTCAGAGTTCCCGCTAAGCTCCTTCATGAACAATGAGCACTTGTGTGGCCCACCATTGGCATTGTGTTCAGGATCTAAAGGACAAGATCAAGTGGTGCTGTCTAACAAAGAAGTGGCTGCAATCATAGTGGCCATTGTGTTTACTTCTACTTTGATATGCTTAGTGTTGTTGTATATTATGGTGAGAATTTGGTGCAACTGGAGGAAAGTTGCGATTTCAAGTGCTGATGGAGGCATTGGTGAGAGAAAGAAAGAGGAGGCGAGATGGATGTATAGTGATAAGAAAACAAGAAATGGAGAGTATTGGAATATGAACACTTTAGGGTTTAGTACTCCATCACCGAATAAGCAGAGTCCAGATCAATCAACGGCTTGTGTTTTCAATCTTAAAAATTAA 3279 0.4029 MDKSYWTLFTHVLLLCLNPEKLSKFRVEGYITELSLKATGNFCINENEMRCFCLHVFELFHLSLHHSPIFLSFINLLFLVLSPLSFSVLKIFSSLFLLHGIVLSNYHHSWFFIMKKRMLVRKSTMGSLWICHFFLFLTLLNASFFTVVLGDNVADSYWLLKMKSKLVDPLGALKDWSPIVPMCSWYGVTCSLDQSHVIGLNLSGSGISGSMSIELITHLTYLQTLDLSSNSLTGSIPSEIGVLQNLRILQLFANYLSGTIPAEIGNLKKLEILRIGDNFLAGEITPSIGNLKELEELGLAFCYFNGSIPTEIGSLKNLVSLDLQMNSLEGHIPKEIQGCEKLQNFAASNNLLEGDIPSSLGSLVSLQILNLANNSLSGPIPSSLTHLSKLKYLNLLGNKLSGKVPSELNSLTQLQKLDLSKNNLSGPINLFNSKLESLQTLVLSDNFLTGNIPANFCFSGSKLEQLFLARNKLSGNFPLELLSCSSLQQLDLSDNRFEGELPTTLDKLQNLKDLALNNNSFTGSLPPEIGNISTLEGLFLFHNTFTGKIPVEFGRLQRLKTIYLYDNQISGPIPREITNCTSLREIDFFGNFFSGPIPETIGKLKDLVLLHLRQNDLWGPIPPSMGYCKSLQLLALADNKLSGSIPPTFGYLSELRTITLYNNSFEGPLSESLFLLKNLKIINFSHNRFSGTILPLTGSHSLNALDLTNNSFSGPIPSSLAMSRNLSRLRLAHNQLTGSIPSEFGQLIELNFFDLSFNNLTGEVAPELSNCKKIQHFLLSNNRLRGKMPSWLGSFQELGELDLSFNDLHGSVPSELGNCSNLLKLSLHHNNLSGEIPQEIGNLTSLNVLNLQSNHFSGLIPSSIQQCKKLYELRLSENLFTGDIPGQLGGLTELQVILDLSKNLLSGKIPSSLGNLMKLERLNLSFNNLQGQVPSSLGKLTSIHMLNISYNHLQAQIPSTFSEFPLSSFMNNEHLCGPPLALCSGSKGQDQVVLSNKEVAAIIVAIVFTSTLICLVLLYIMVRIWCNWRKVAISSADGGIGERKKEEARWMYSDKKTRNGEYWNMNTLGFSTPSPNKQSPDQSTACVFNLKN 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1595 1092 SUPERFAMILY L domain-like 459 784 - -
Alju13g1595 1092 Gene3D Ribonuclease Inhibitor 696 987 IPR032675 -
Alju13g1595 1092 Pfam Leucine Rich Repeat 222 242 IPR001611 GO:0005515
Alju13g1595 1092 Pfam Leucine Rich Repeat 918 940 IPR001611 GO:0005515
Alju13g1595 1092 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 405 501 - -
Alju13g1595 1092 Gene3D Ribonuclease Inhibitor 404 501 IPR032675 -
Alju13g1595 1092 Gene3D Ribonuclease Inhibitor 598 695 IPR032675 -
Alju13g1595 1092 SUPERFAMILY L domain-like 178 499 - -
Alju13g1595 1092 FunFam Uncharacterized protein 310 404 - -
Alju13g1595 1092 Pfam Leucine rich repeat N-terminal domain 157 191 IPR013210 -
Alju13g1595 1092 SMART LRR_typ_2 676 701 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 219 243 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 795 819 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 916 940 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 363 387 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 435 459 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 508 532 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 411 433 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 556 580 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 315 338 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 843 866 IPR003591 -
Alju13g1595 1092 SMART LRR_typ_2 747 771 IPR003591 -
Alju13g1595 1092 Pfam Leucine rich repeat 365 424 IPR001611 GO:0005515
Alju13g1595 1092 Gene3D Ribonuclease Inhibitor 153 306 IPR032675 -
Alju13g1595 1092 Gene3D Ribonuclease Inhibitor 502 597 IPR032675 -
Alju13g1595 1092 PRINTS Leucine-rich repeat signature 411 424 - -
Alju13g1595 1092 PRINTS Leucine-rich repeat signature 222 235 - -
Alju13g1595 1092 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 695 987 - -
Alju13g1595 1092 SUPERFAMILY RNI-like 704 964 - -
Alju13g1595 1092 PANTHER POLYGALACTURONASE INHIBITOR 1 341 456 - -
Alju13g1595 1092 SMART LRR_sd22_2 315 341 - -
Alju13g1595 1092 SMART LRR_sd22_2 411 440 - -
Alju13g1595 1092 SMART LRR_sd22_2 556 588 - -
Alju13g1595 1092 SMART LRR_sd22_2 387 410 - -
Alju13g1595 1092 SMART LRR_sd22_2 267 293 - -
Alju13g1595 1092 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 598 694 - -
Alju13g1595 1092 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Alju13g1595 1092 FunFam Uncharacterized protein 502 597 - -
Alju13g1595 1092 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 152 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1595 Alju-ChrAlju13 34239892 34244515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1595 168 984 Receptor kinase-like Gene Family AT5G46330 36.085 1.79e-128 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1595 13 34239892 34244515 Alju13g1595 13 34239892 34244515 ECH