Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1574 ATGTACATTGACACCTTTATCCTCCGTCAAGAACCGTCATCATCGAAGCGAAAGGATGGCACACTACGTAATTTATCCAACAAAGTCCAACCCGCAACATTTACAGGGTTTTATTGTATCGTCATGTGTTTCGACAATATGTTGCTAGGAATCTGTCACAATGGATCTAGTCCACGATTGGAAGTTGATGAGATTGGAACTTCAGCTTCGAACAAATCCATTAAGCAAGAGGAAAGCGATGCATCAGATTATATGAAGATCCAGAATTCGGTCTGGGAGACTGCGAGCAATGAAGGATCAATAGTTTCAGATTGCGAAAGTGCTGTTTCTGGAAGCGATCATGTGCAGCACCAGATGTTCGGTGAAGGGTTTTTTAGACTCGCTGAAGGAGATAGGGTTCATGATCTCATTCAGAGAAGATTCATTCTGGGTTTGGGGACGCTTGGGGCAAATACGAAGGTCGTTGCAATTCATAGGAATGCTAGTTCTGGCGTTATTGCGCAAGCTCGAATTCAATCATTCCAGGTTTATATGCGGGCTGAGGAGAAGCGTCGTGGTAATGCCAATGTGAAGTATGCGTGGTATGGGACTTCTGGCAAGGAAGAGATACGAGATATTATTTCACACGGTTTTTGTAACGGCGGTGAAACTCTGAATAAAGGACATTTTGGATGCGGATTATCTCTCTCTTCAGATGATTCTCCTATGGAAAGTTTGAAAAGCTCTATTGTTGACAGAGACGGTCTAAGGCACTTATTACTGTGTCGCGCTATTTTGGGGAGGCAGGAGCTTGTGCATCCTGGTTCTGATCAATGCCATCCGAGTTCTGAAGAATATGACTCAGGGGTGGACAGCCTTTCAGCTCCCAAGAAGTATATCATTTGGTGTACCCGGATGAACACTCATATTTTTCCGGAATATGTTATAAGTTTCGAAGTTCCTAGCATGAAAGAGCTGGTGAAGTTTGAAGAAACTTCAAGAAAACCATCTTCCCCTTGGATACCATTTCCAAGTCTAATTTCTTCGCTCGCCAAGCTTTTGCCTCCATCTAGTATTGCCTTGATCTCCAAGTTCCACAAAGATCACAAAGAAAAGAAGATTTCACGGAAAGAACTCATACAAAAAGTAAGACGAATAACAGGAGACGAGTTGTTGGTTACAGTCATCAAATCTTTCATAGCAAGGAAACGTACAAGCGTTCAACTAAGTCTGGTTGAGGATTTTGAAGATTTGTCATGTGTTGAACTTTGGAATGGAATGATATCATCCAAGAACAAGGAAAGCTATATGGACTTCCTTGAATTAATGGCTTTTACTGCGGTTTCTTCTCTGAAATGTTCAGATGGCAAGACTTCATGTTTAGCCAAGGCCACAAACTCAGCCCACTGCTCACCAAGTTTCCTGTGTGCATATCTGATTGGTATTGGTATCAATTTTCCATCTGCAGTAACCTTGCATAATGCACAATTTATGAGGACAACTTATTATGGAATCACTTGTGACATGTTACGTTGCAAGATTTTGGCCATTGGATTAATCCCAGAATATTAA 1551 0.4172 MYIDTFILRQEPSSSKRKDGTLRNLSNKVQPATFTGFYCIVMCFDNMLLGICHNGSSPRLEVDEIGTSASNKSIKQEESDASDYMKIQNSVWETASNEGSIVSDCESAVSGSDHVQHQMFGEGFFRLAEGDRVHDLIQRRFILGLGTLGANTKVVAIHRNASSGVIAQARIQSFQVYMRAEEKRRGNANVKYAWYGTSGKEEIRDIISHGFCNGGETLNKGHFGCGLSLSSDDSPMESLKSSIVDRDGLRHLLLCRAILGRQELVHPGSDQCHPSSEEYDSGVDSLSAPKKYIIWCTRMNTHIFPEYVISFEVPSMKELVKFEETSRKPSSPWIPFPSLISSLAKLLPPSSIALISKFHKDHKEKKISRKELIQKVRRITGDELLVTVIKSFIARKRTSVQLSLVEDFEDLSCVELWNGMISSKNKESYMDFLELMAFTAVSSLKCSDGKTSCLAKATNSAHCSPSFLCAYLIGIGINFPSAVTLHNAQFMRTTYYGITCDMLRCKILAIGLIPEY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1574 516 ProSiteProfiles PARP catalytic domain profile. 111 331 IPR012317 GO:0003950
Alju13g1574 516 Pfam RCD1-SRO-TAF4 (RST) plant domain 328 392 IPR022003 -
Alju13g1574 516 Gene3D - 124 313 - -
Alju13g1574 516 ProSiteProfiles RST domain profile. 327 398 IPR022003 -
Alju13g1574 516 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 71 392 IPR044964 -
Alju13g1574 516 SUPERFAMILY ADP-ribosylation 126 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1574 Alju-ChrAlju13 33974339 33978398 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2554 06 52560662 52561558 Alju13g1574 13 33974339 33978398 CCT
Alju13g1574 13 33974339 33978398 Alju13g1574 13 33974339 33978398 ECH