Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1523 ATGGCTCCGTCTTCAGCTCCGGGTCATAGCCTCAAACAGAAGGTGTTCACTTGTCTCACCAAGCTCTCCGACCGCGATACTCAGTCCATCGCCGCCAATGAGCTCGAGTCCATTGCTCGGAACCTTGATTCAAGCTCCGTGCCGGTGTTCCTCTCGTGCATTCACTCCACCAATTCATCAGACAAATCGCCGGTTCGTAAACAATGCGTACACCTCATGCAGGTTCTTTCGGAAACGCACGGGAACACGCTTTCTCCTTATCTTTCAAAAATTCTTGCACATATAGTTCGTCGGCTCCGTGACCAGGACTCGTCGGTTCGATCTGCTTGCGTGAATTCCGTGTCGGCATTGTCTGCGCACATCACCAAGCAACCGTTTGCTTCATTCCTGAAGCCGTTAACTGAGGCGCTGTTCACTGAGCAGGACCAGAACTCACAGTTAGGCGCGGTGCTTTGTCTGGCTTCTGCCATTGATGCAGCTCCTGACCCGGACCCTGCGAGATTGGTTAAGCTCTTGCCGAAGTTCGAGAAGTTGTTGAGAAGCGGGAGCTTTAAGGCGAAACCGGCGCTGTTAACGCTCATTGGAAGTGTTATTGAAGCCGGTGGACTGTCCAGTCATGCGGCTTTGAGCAATTTGGTTCCATGCATGGTGGAATTCTTGAGCAGCAACGACTGGTCGGCCAGGAAGGCTTCGGCCGAGACATTGACCAAGTTGGCGATAGTGGAGAGGGACGTGTTATCAGAATTCAAGGCTGGATGTTTGAATGTCTTTGAGAATCGACGATTCGACAAGGTTAAGGTAGTTCGGGAGGTTATGAATCAGATGGGTGAGGCGTGGAAGCAGATTCCTGATATATCGGATGGATTCTCTCCACCACCTAAATCCCAATCTTCTTCCTCAGAAAATGTAAGTGATGGGCGTTATCCGGCATTCTCACAGAATTCATGTAGTCCTGGCTCTGTAATGCCTCGATTATGGAAGAAATCCAATCCAGTTAGCAAATCAAGCCCTGATAGTTCTTCTGTGAGCAATGCTAAGAAATTAAGCTTTAGTAACAAGAGAACAAGCACAGGTGTGTTGCCAAAACTAAGCCATAAGAATCAGGATGTTAGAATTGCTGTGCCAAGTGCTCCCACTGCTGTAGGTGCTTATCAGGGTTATCTTGAAGAGAGAAATGAAATGGAAAAAAACAAAAAGGAGAAAAGTAACTTTTCCAGGCCAGAACTGAAACGGCCCATTCTCAATAAAAATCTGGATGAAAGAAAACGCACGTTTGGTGGCTCCAAAACAGGATCTCGTGTAGTTCCATGTCATGAAGAGAGCCAAGATTCAGTTGCTATCAGTGATGTTGCTAAAGATTTCCATGGGAATGACAAATACTGTGAAGAGTTAGCTTTAATCCGCAGCCAGTTATTTCAAATTGAAAAGCAGCAGTCAAATATACTTGATCTCTTAGAGAGATTCATGAATAGCTCACAGAATGGAATACAATCATTAGAGTCTCGTGTACATGGCCTTGAGTTAGCATTGGAAGGGTTCTCTCATGATTTGGCTGTATCAAATAGAAGGGTGACTAATTCTGTTGCTCCCGGAGATTCTTGCTGCTTGCCGCCTGGTGCCGAAATTCTGAGCCCCAAATTCTGGAGGAAAACACAGGTCCTCTATCCATACTCCCAGTTCTCTAGATTTGGTGGCACCCCATCACAAGCTGCCATGTGGTACAGAGCTCACATGAAGGGTGATTCTGAAACTGAGTTGACAAATCAAAAGCGCAGACTCCATGGTGATGGTGGATTCATCACAAATCCTCTGGCAGAAGTTCATACTAACTTGGCAGATACAAGACATTGTGCCAGAGATAGCCAATGA 1869 0.4671 MAPSSAPGHSLKQKVFTCLTKLSDRDTQSIAANELESIARNLDSSSVPVFLSCIHSTNSSDKSPVRKQCVHLMQVLSETHGNTLSPYLSKILAHIVRRLRDQDSSVRSACVNSVSALSAHITKQPFASFLKPLTEALFTEQDQNSQLGAVLCLASAIDAAPDPDPARLVKLLPKFEKLLRSGSFKAKPALLTLIGSVIEAGGLSSHAALSNLVPCMVEFLSSNDWSARKASAETLTKLAIVERDVLSEFKAGCLNVFENRRFDKVKVVREVMNQMGEAWKQIPDISDGFSPPPKSQSSSSENVSDGRYPAFSQNSCSPGSVMPRLWKKSNPVSKSSPDSSSVSNAKKLSFSNKRTSTGVLPKLSHKNQDVRIAVPSAPTAVGAYQGYLEERNEMEKNKKEKSNFSRPELKRPILNKNLDERKRTFGGSKTGSRVVPCHEESQDSVAISDVAKDFHGNDKYCEELALIRSQLFQIEKQQSNILDLLERFMNSSQNGIQSLESRVHGLELALEGFSHDLAVSNRRVTNSVAPGDSCCLPPGAEILSPKFWRKTQVLYPYSQFSRFGGTPSQAAMWYRAHMKGDSETELTNQKRRLHGDGGFITNPLAEVHTNLADTRHCARDSQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1523 622 MobiDBLite consensus disorder prediction 329 349 - -
Alju13g1523 622 Gene3D - 9 379 IPR011989 -
Alju13g1523 622 FunFam TORTIFOLIA1-like protein 3 isoform A 2 357 - -
Alju13g1523 622 MobiDBLite consensus disorder prediction 290 320 - -
Alju13g1523 622 MobiDBLite consensus disorder prediction 282 349 - -
Alju13g1523 622 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Alju13g1523 622 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 580 IPR033337 GO:0005874|GO:0008017
Alju13g1523 622 SUPERFAMILY ARM repeat 13 373 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1523 Alju-ChrAlju13 33594749 33597263 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2617 06 53180861 53183264 Alju13g1523 13 33594749 33597263 CCT
Alju13g1523 13 33594749 33597263 Alju13g1523 13 33594749 33597263 ECH