LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g1510	ATGAAGAGAGGCAAATTAGTTAAGTTAGATAATTTTGTATCATTGACAAGGCAGAGATCCGTTCAGATTCTGATCGGGGTTGGGCTTTTGTATATACTGTTGGTCACAGTGGAAATCCCTTTTGTATTCAAAACTGGGTTTAATTCTGTGTCTCAGGAGTTCTTAACTCGCCCTTCTAAGCTTGAGAGCGAGGAGGACTTGGAAGAAAGAGAGGCCCCTTCTCGTCCTCTTGAAAAAGTTTCTATGAACGCATACCATCCGGTTCCGAGCCAACTCGCTGAGCACAAGATTCTTTCAGGGTTGATCTTTGATAACACTACATTCGATTTGCGCGGTAAGGATGGGTCTCTGGAGCTTTACAAGTCAGCTAAGAATGCGTGGAAAGTGGGGAAGAAAATTTGGGATGAGCTAGAATCCGGGAAATCGCGAGCTGCCGCCAAGAAATCCGAGAGCCGATCGGATTCGTGCCCGCGATCGATTTCCTTGTCCGGGTCGGATTTTTTGGCCCATGGGCGACTCATGGTTCTCCCTTGTGGGCTGACATTGGGGTCCCACATAACCGTTGTGGGAAAGCCGTTGGCGGCGCACGCAGAGTTCGAACCGAGGATATCGTTGGCGAAGAATGATGATGAACCGGTGATGGTGTCACAGTTCATGATGGAGTTGCAGGGTTTGAAAACAGTGGACGGCGAGGAACCCCCAAGGGTTTTGCACTTTAATCCCAGATTGAAAGGAGATTGGAGTGGGAAGCCTGTGATTGAGCTCAACACCTGTTACCGAATGCAGTGGGGTTCCGCGCTTCGATGTGATGGTTGGAAATCGAAGGCTGATGAAGAGACCGTTGATGGGTTGGTGAAGTGTGAGAAGTGGATTCGGGACGATGACAATCATGCTGAGGAGTCCAAGTCTAGATGGTGGGTGAATAGACTGACAGGCCGGACCAAGAAAGTTTCAGTTGACTGGCCATTCCCATTTTCTGAGAGCAAGCTATTTGTTCTCACTCTTAGTGCTGGATTGGAGGGTTATCATATTAATGTTGATGGGAGGCATGTGGCATCTTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCCACTGGTCTTTCTTTGAGTGGGGACATTGATGTCCACTCTGTATTTGCTGCCTCTTTGCCTTCAACCCATCCAAGTTTTGCCCCACAGAAGCATCTTGATTGGTCAAGTAGATGGCGTGCCCCTCCTCTTCCTAATTTTGATGTTGAAATGTTCATCGGCATCCTTTCTGCCGGAAATCACTTTGCTGAGCGGATGGCTGTAAGAAAGTCATGGATGCAACATTGGCTCATCAAATCTTCAAAAGTGGTGGCCCGTTTCTTTGTAGCACCGCATCCCAGAAAAGAAGTAAATGCAGAGTTAAAGAAGGAAGCAGAATATTTTGGTGACATTGTTGTAGTGCCCTACATGGATAACTATGATCTTGTTGTGCTGAAAACAGCGGCCATTTGTGAATATGGGGTTCGCACAGTTAATGCCAAGTATATCATGAAGGGTGATGATGACACTTTTGTAAAAGTGGACGATGTATTGGAGTTAGCAAGGAACGTTCCGGATGACAAGAGCTTCTATATTGGGAACATAAACTACTACCATAAGCCCTTGCGCTATGGTAAATGGGCAGTGACATACGAGGAGTGGCCTGAAGAGGATTACCCACCCTATGCTAATGGACCTGGTTATATTTTGTCGTCTGATGTTGCACGCTTCGTCATGTCTGAATTTGAAAGGCATAAATTAAGGTTGTTTAAAATGGAAGACGTAAGTATGGGAATGTGGGTAGAGCAATTCAACAGGACGAAGCCGGTGGAGTATTTGCACAGCTTGAGGTTCTGCCAGTTCGGTTGCGTGGAAGGCTATTTCACGGCTCATTACCAATCGCCAAGGCAGATGATGTGTATGTGGGACAAATTGCAGAGACAGACAACTCCTGAGTGCTGCAACATGAGATGA	1986	0.4663	MKRGKLVKLDNFVSLTRQRSVQILIGVGLLYILLVTVEIPFVFKTGFNSVSQEFLTRPSKLESEEDLEEREAPSRPLEKVSMNAYHPVPSQLAEHKILSGLIFDNTTFDLRGKDGSLELYKSAKNAWKVGKKIWDELESGKSRAAAKKSESRSDSCPRSISLSGSDFLAHGRLMVLPCGLTLGSHITVVGKPLAAHAEFEPRISLAKNDDEPVMVSQFMMELQGLKTVDGEEPPRVLHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKADEETVDGLVKCEKWIRDDDNHAEESKSRWWVNRLTGRTKKVSVDWPFPFSESKLFVLTLSAGLEGYHINVDGRHVASFPYRTGFTLEDATGLSLSGDIDVHSVFAASLPSTHPSFAPQKHLDWSSRWRAPPLPNFDVEMFIGILSAGNHFAERMAVRKSWMQHWLIKSSKVVARFFVAPHPRKEVNAELKKEAEYFGDIVVVPYMDNYDLVVLKTAAICEYGVRTVNAKYIMKGDDDTFVKVDDVLELARNVPDDKSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDVARFVMSEFERHKLRLFKMEDVSMGMWVEQFNRTKPVEYLHSLRFCQFGCVEGYFTAHYQSPRQMMCMWDKLQRQTTPECCNMR	661

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g1510	661	SUPERFAMILY	Concanavalin A-like lectins/glucanases	174	380	IPR013320	-
	Alju13g1510	661	Gene3D	-	172	287	-	-
	Alju13g1510	661	SMART	Gal_bind_lectin_2	176	381	IPR001079	GO:0030246
	Alju13g1510	661	ProSiteProfiles	Galactoside-binding lectin (galectin) domain profile.	172	382	IPR001079	GO:0030246
	Alju13g1510	661	FunFam	Hydroxyproline O-galactosyltransferase GALT2	296	380	-	-
	Alju13g1510	661	MobiDBLite	consensus disorder prediction	140	154	-	-
	Alju13g1510	661	Pfam	Galactoside-binding lectin	172	380	IPR001079	GO:0030246
	Alju13g1510	661	Pfam	Galactosyltransferase	428	608	IPR002659	GO:0006486\|GO:0016020\|GO:0016758
	Alju13g1510	661	MobiDBLite	consensus disorder prediction	140	159	-	-
	Alju13g1510	661	FunFam	Hydroxyproline O-galactosyltransferase GALT4	171	289	-	-
	Alju13g1510	661	Gene3D	-	294	380	-	-
	Alju13g1510	661	PANTHER	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE	363	611	IPR002659	GO:0006486\|GO:0016020\|GO:0016758
	Alju13g1510	661	FunFam	Hydroxyproline O-galactosyltransferase	406	649	-	-
	Alju13g1510	661	Gene3D	-	411	656	-	-
	Alju13g1510	661	CDD	GLECT	176	380	IPR001079	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g1510	Alju-ChrAlju13	33517228	33520379	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g1510	5	661	Glycosyltransferase	AT1G74800	66.766	0.0	929

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju06g2632	06	53329600	53332827	Alju13g1510	13	33517228	33520379	CCT
	Alju13g1510	13	33517228	33520379	Alju13g1510	13	33517228	33520379	ECH