Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1477 ATGGCTAGTGTTAGAGGTGGAAGACGGGTTGGAGTCAGAACAAGCTCACGTCCTCCTCTTGTGGAACAGATGGTGCCTAATTCTGGTTGGACAGAGGACTCTTCCTGCCACTATCTTCTAGTTGATCTTCCTGGGTTCAAAAAGGAAGAGGTGAAGCTTCAGGTGGAGGGTTCTGGCTATATCAAAGTAAGAGGAGAAAGGCAAGTGAACGAAGAGAAACGTGTTCATTTTGAGCTGGTTTTTCCGGTGCCAAAGGATTCTGATGCTGACAAGATAGCTGGGAAATTTGATGGTGAGATCCTTTATGTGACTATCACCAAGAGAGCTGCACAAGGGAACACAGAAACTGAACCAGCTAAGCCTGAACATGGCAGTGCAAGTAATGTTAAGAGACAAGAAGAAAATTTCAAACACGAGCAACACAGTGCTGATGATGATAATCAACAAAGAGATCATAACAGACAAGATGACCGCCATATGGAGGAGGAAAGAAGAAATGAGACCGCCCAGGTTGGGGGTTTTACTCAAGAGTTGATAAGGAAGTGGGAAAAAGAACCTACCAGTACCATATTATCAAGTGCAGTGAAAGTTTTAAGACAGAACAAGGGAATTGTTATCACTGCAGTTTTAGCCTTTTCCTTAGGATTGTTAGTTTCTCGCAAGTTTCAATCCTCATCAGCAGAATAA 687 0.4323 MASVRGGRRVGVRTSSRPPLVEQMVPNSGWTEDSSCHYLLVDLPGFKKEEVKLQVEGSGYIKVRGERQVNEEKRVHFELVFPVPKDSDADKIAGKFDGEILYVTITKRAAQGNTETEPAKPEHGSASNVKRQEENFKHEQHSADDDNQQRDHNRQDDRHMEEERRNETAQVGGFTQELIRKWEKEPTSTILSSAVKVLRQNKGIVITAVLAFSLGLLVSRKFQSSSAE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1477 228 MobiDBLite consensus disorder prediction 135 168 - -
Alju13g1477 228 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 122 IPR002068 -
Alju13g1477 228 Pfam Hsp20/alpha crystallin family 32 112 IPR002068 -
Alju13g1477 228 Gene3D - 11 113 IPR008978 -
Alju13g1477 228 SUPERFAMILY HSP20-like chaperones 19 111 IPR008978 -
Alju13g1477 228 CDD ACD_sHsps-like 30 107 - -
Alju13g1477 228 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 29 115 IPR031107 -
Alju13g1477 228 MobiDBLite consensus disorder prediction 135 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1477 Alju-ChrAlju13 33308461 33309276 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1477 13 33308461 33309276 Alju13g1477 13 33308461 33309276 ECH