Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1448 ATGGGGGACCGCATCGTTGTGCCTATCGACCCCCTTGTCATTCCTGCAAGTCTGCAATCACCGCATGATGCTGATGCCCAATTATTATCCAGTGAGGGATCCAGTTCTCAAATTGCTGATATTTTTACCAGTGATGTTCATGTCGTTGAAGTTGGGGGATTTGAAACATCGGACGATGAACACCTTGTTCAAAAAGTAGAATGTCGCATTTGCCAGGAGGAAGATAGCCTTGATAATATGGACACTCCCTGTGCTTGTAGGGGCACCATCAAGTTTGCTCACTGGAGATGTGTTCAACGATGGTGCAATGAAAAGGGAGACACAATTTGTGAGATCTGCCGTCAGGTAACCTCCTTGCAATATCAGACTGGTTGGACAATCTCCCATGCCACTTTAGATCTGCATGATCCTCATACTTTGGCAATTGCAGCATTGGAGCACCATGTTCTTGAAGCTGAGCATGGTGACTATGTTTACAGTAGCATGAGCGGTATTGGTTTTTTCCAGTTTATTGGTCTAATTTTAATAACACTTTTAATTCTAAGGCATGCTGCTTCACTCATAAATGCTGATGTTGAGAAAGCTTTGACTTATTTTTTGTTCATCTTGTTTCGTGCTGCTGCTTTTGTACTTCCTTTCTATCTCATGGCTAGAACCATTCGTTTAATACTGACTCGACGGCAAAGACAGCTTGCTGCTGCAGAACTTGAATTTATGCTACCGGCAGGGCAACATCATGGCTTACAGTTTGCAACATCACCAGTGCCTGCTTTTCACTTATAA 783 0.433 MGDRIVVPIDPLVIPASLQSPHDADAQLLSSEGSSSQIADIFTSDVHVVEVGGFETSDDEHLVQKVECRICQEEDSLDNMDTPCACRGTIKFAHWRCVQRWCNEKGDTICEICRQVTSLQYQTGWTISHATLDLHDPHTLAIAALEHHVLEAEHGDYVYSSMSGIGFFQFIGLILITLLILRHAASLINADVEKALTYFLFILFRAAAFVLPFYLMARTIRLILTRRQRQLAAAELEFMLPAGQHHGLQFATSPVPAFHL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1448 260 SMART ringv_2 67 114 IPR011016 GO:0008270
Alju13g1448 260 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 230 IPR033275 -
Alju13g1448 260 CDD RING_CH-C4HC3_MARCH 68 114 - -
Alju13g1448 260 Pfam RING-variant domain 68 113 IPR011016 GO:0008270
Alju13g1448 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 126 IPR013083 -
Alju13g1448 260 ProSiteProfiles Zinc finger RING-CH-type profile. 60 120 IPR011016 GO:0008270
Alju13g1448 260 Pfam Protein of unknown function (DUF3675) 117 220 IPR022143 -
Alju13g1448 260 SUPERFAMILY RING/U-box 65 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1448 Alju-ChrAlju13 33045729 33053285 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1448 13 33045729 33053285 Alju13g1448 13 33045729 33053285 ECH