Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1427 ATGAGTGGGGTATTCGAAGGGTACGAGCGTCAATACTGTGAACTTTCGGTTAATCTTTCCCGCAAATGCACGGCGGCGTCTGCCCTAGATGGAGAGAAGAAGAAGCAGAAGCTTTCTGAAATCAAAGATGGACTTGATGAAGCTGACACATTGCTTCGAAAAATGGACCTTGAGGGCAGGAGCTTGCAGGCAAATATAAAGGCAACACTTCTTGCCAAGTTAAGGGAATATAAAACTGATCTGAACAATTTGAAAAATGAAGTTAAGAGAATCTCATCAACTAATAATACCAACCCGACGGCGCGAGATGAGTTGCTGGAGTCAGGAGATGCTGATTCACTAATGGTATCAAATGATCAAAAAGGAAGACTGTTGATGTCAACTGAGAGGTTAAACCAGTCGACAGAGAGAATAAAAGCCAGTAGAAAAACAATGCTGGAGACTGAGGAACTTGGAGTGTCTATCCTCCAAGACCTTCATCAACAACGTCAATCCCTACTTCATGCTCATCAGACGCTCCATGGGGTAGATGATAATATCAGCAAAAGCAAGAAGGTTTTGTCATCAATGTCAAAAAGAATGAGCAGGAATAAATGGATTGTTGGCTCCTTCATCATAGCTCTGGTCCTAGCAATTCTATTGATCTTGTATTTTAAGCTGACTCGCTAG 669 0.4215 MSGVFEGYERQYCELSVNLSRKCTAASALDGEKKKQKLSEIKDGLDEADTLLRKMDLEGRSLQANIKATLLAKLREYKTDLNNLKNEVKRISSTNNTNPTARDELLESGDADSLMVSNDQKGRLLMSTERLNQSTERIKASRKTMLETEELGVSILQDLHQQRQSLLHAHQTLHGVDDNISKSKKVLSSMSKRMSRNKWIVGSFIIALVLAILLILYFKLTR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1427 222 PIRSF Membrin-2 6 219 IPR027027 GO:0005484|GO:0005794|GO:0016192
Alju13g1427 222 CDD SNARE_Vti1 128 189 - -
Alju13g1427 222 SUPERFAMILY t-snare proteins 6 92 IPR010989 GO:0016020|GO:0016192
Alju13g1427 222 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 10 217 - -
Alju13g1427 222 SUPERFAMILY SNARE fusion complex 131 190 - -
Alju13g1427 222 Gene3D - 118 198 - -
Alju13g1427 222 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 1 99 - -
Alju13g1427 222 Pfam Snare region anchored in the vesicle membrane C-terminus 129 194 - -
Alju13g1427 222 Coils Coil 67 94 - -
Alju13g1427 222 FunFam Vesicle transport through interaction with t-SNAREsB 118 198 - -
Alju13g1427 222 Gene3D - 1 98 IPR038407 -
Alju13g1427 222 Pfam Vesicle transport v-SNARE protein N-terminus 12 90 IPR007705 GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1427 Alju-ChrAlju13 32892856 32894743 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1427 13 32892856 32894743 Alju13g1427 13 32892856 32894743 ECH