Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1178 ATGGCGAAATTGAAGATTGCCGGCACATGGTCAGGAGTGTTAGAGGTTGAACTCGAGACTTGGACGCTATCCATGTTGAGAGAAGAAATCGCCAAGCGATCCAACATCGGCGTCGACTCCATCAATTTGATATGCGCCGGAAAAATTTTGAAAGGCGGCGATGGCCAAGAGAAATTGAGCCAACTCGGTATGAAAAATAACACCAGAATTCTTGCGAGTCGTATCTGTGCTGAAGAAGGCAAGGTTTTGATGGCCGAGGAGGAACGCATCAGCAGGCTTGCGCGAGTCAAGGCAGCTGCCACAGCACTCGCCAATAGGCATGCTGATGGGTCATTACCTATGGAAGACTTCAACATAGAAGTTGAAGATCAAAGTGGACAAAAAGTGCAGTTAGGTTCGGAGACGGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAATGGAAAACGTCTTATCGGACACAAAAACTACAATGATGCTTTACAAGTGCTCTCTATGGGTGAGGAATCATTCTCTCTTTGTGATCCAAAGGTCATTGAGCTTGTTGACAATGTTCCAATACTGCAAATAGACATGGTCTGGTGCTACTTTATGATCCGAGACATCAGATGGCTATCAGAGGCTGGAAAACGTCTTGAATTGGCTAGGGCTGGAATTGAGCGTTCTCATGGAAAGGATTCCCTGCGCCTTAGACTTCTACAGGGAGGTTGCTATCCTGAACTTGCATTGCATTTAAGACTAGAGCTACTTGAAGGGGTGGTGGCTTATCATAGTGGTAAGTTGGATAAAGCAAGAGATGCGCTGACTTCTGCAAAAGCAAAATTCATCCGGCTGCAAGTGTCAGATGAAACCTTATCATTTGTTATGAGCATGGGATTCAAAGAGCGTGATGTAAAGCGAGCATTAAGGATGAACAATCAAGAGGTGGGAAGAGCCATCGATTTTCTCGAGGAGGAGAAGGCAAAGAAACAGCGAAAACGGGAAGAAGATATAAGAAGAAGAAATGAAATTATGGAACAAAAGCGTTATGGGCTGACACCCTTAAAGAAAGCTGTGGATCTGCAGAAGTTGAAGGATTTGGTCTCTTTGGGATTCGAGAAGGAACTTGCTGCCGAAGCCCTTCGAAGAAATGAAAATGATTTTGACAAGGCATTGAATGATTTGACGAATCCAGAAGCTAATTCTGCTATACAGGTTCACATCGAGACAAAGAAAACAAAACGGCAGAGGCAATCAAAAGAGTCTCAAATTGAAAATTTTGTCCGCATGGGGTTTGAAAGATCAAGAGTGGTAGCTGCCGTCGAGGCTGGTGGCCCTTTGGATCAAATAGTGCAAAGACTGACCGCGCAACCCGAGGAAAACATGCAAATAGAAGCAAGTTCAACTGCTAACGCTGCGATTTCTTCTGCTCCTTTGCCGGATAACATTGATTCTAACATTCCAGGCCTAACTGAGGACGTTGAAGGTCCATCGGAAGATCTCGGCAAAGCAGAGGAGCGAGATGTGGAAATGGAAGATGAGCTTTCTGCAGATATAGCAAAAGCTGATGATGCGTTGGCTGACTATGATATCGAAGTTAATATAGAAGGGGAAGCCATAACAGAATACCTGTCCCTGTTGGAGTCAGCAGCAGGCAGTAGCAGTGGGCAAAAGTTACCTTCTCAGTAA 1674 0.4504 MAKLKIAGTWSGVLEVELETWTLSMLREEIAKRSNIGVDSINLICAGKILKGGDGQEKLSQLGMKNNTRILASRICAEEGKVLMAEEERISRLARVKAAATALANRHADGSLPMEDFNIEVEDQSGQKVQLGSETDQRAVMMGLMLHANGKRLIGHKNYNDALQVLSMGEESFSLCDPKVIELVDNVPILQIDMVWCYFMIRDIRWLSEAGKRLELARAGIERSHGKDSLRLRLLQGGCYPELALHLRLELLEGVVAYHSGKLDKARDALTSAKAKFIRLQVSDETLSFVMSMGFKERDVKRALRMNNQEVGRAIDFLEEEKAKKQRKREEDIRRRNEIMEQKRYGLTPLKKAVDLQKLKDLVSLGFEKELAAEALRRNENDFDKALNDLTNPEANSAIQVHIETKKTKRQRQSKESQIENFVRMGFERSRVVAAVEAGGPLDQIVQRLTAQPEENMQIEASSTANAAISSAPLPDNIDSNIPGLTEDVEGPSEDLGKAEERDVEMEDELSADIAKADDALADYDIEVNIEGEAITEYLSLLESAAGSSSGQKLPSQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1178 557 SUPERFAMILY UBA-like 275 321 IPR009060 GO:0005515
Alju13g1178 557 SMART uba_6 283 320 IPR015940 -
Alju13g1178 557 SMART uba_6 355 392 IPR015940 -
Alju13g1178 557 SMART uba_6 415 451 IPR015940 -
Alju13g1178 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 353 393 IPR015940 -
Alju13g1178 557 MobiDBLite consensus disorder prediction 491 509 - -
Alju13g1178 557 ProSiteProfiles Ubiquitin domain profile. 22 70 IPR000626 GO:0005515
Alju13g1178 557 SUPERFAMILY UBA-like 351 393 IPR009060 GO:0005515
Alju13g1178 557 MobiDBLite consensus disorder prediction 470 509 - -
Alju13g1178 557 Gene3D - 5 74 - -
Alju13g1178 557 CDD UBA 359 388 - -
Alju13g1178 557 Gene3D - 259 324 - -
Alju13g1178 557 SUPERFAMILY Ubiquitin-like 19 71 IPR029071 -
Alju13g1178 557 Coils Coil 301 343 - -
Alju13g1178 557 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 281 321 IPR015940 -
Alju13g1178 557 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 2 546 IPR039749 -
Alju13g1178 557 Gene3D - 357 393 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1178 13 30513958 30518725 Alju13g1178 13 30513958 30518725 ECH