Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0903 ATGCGCTCAGGAGGTTGTGCATTACAGCAGACCCTCACATCGGAGGCTGCAACTGTGTTAAAACATTCTCTGGGCTTGGCCCGCCGGAGGGGCCATGCCCAGGTCACTCCACTCCACGTGGCAGCCACCTTGCTCAGCCTTAGAGCCAGTTCCTTCAGAAGGGCTTGTCTCAAATCTCATCCTCATCACCAAACTTCTCCACATAATTCACAATTTCCTCTCCATTGTAGAGCCCTTGAGCTCTGTTTCAATGTGGCTCTCAATAGGCTCCCAACCACACCAACTCCAAATCTGCTTCACACCCATCACCAGCCTTCTCTTTCAAATGCTCTCATTGCTGCTCTCAAAAGAGCTCAGGCTCACCAGAGGAGGGGTTGCATAGAACAACAGAATCAGCAGCCACTTTTGACCATAAAAGTAGAGCTTGAACAGCTTGTTATCTCTATTCTTGATGACCCTAGTGTTAGCAGAGTTATGAGAGAGGCTGGGTTTTCCAGTACTGCTGTGAAGAGCAGTATAGAGGACTCTTCAGTTTCACCTCCTTGTTCTGTTTTCCAGTGTTACAGTAATTCTGGAGGTGTCTTTTCTTCTCCTTGTTCTCCTTCTCCCAGTGAAAACCAGAGGGAAACCATCAATCCCAACAGTTTCAGGCACACTCACTTCTACACTACTGCTCCTGAGTACTACAACACAGTTCTTTTCTCTCCTCAAAAGAGAACCCCAGTGTACCCTATCACTGAACCAGCTTTATCTAAGGAAGACATCAAGTTGATTTTGCATGTTCTCTTGAGGAGGAAGAAGAGGAATGCTGTGATAGTTGGGGATTCTGTGTCCATCACTGAAGGTCTTGTGGGAGAGTTGATGGGAAGGTTAGACAAAGGAGAGGTTCCTGATGAGTTGAAGTCAGCAAGTTTCATCAAGTTTCATCTAGCACCAGTTTCATTGAGGTCCATGAAGAGAGATGAAGTTGAGATGAACCTCTTGGAGCTGAAAAGAAAGGTTGATTCTGCTGCATCAGGAGGAGGTGGTGGTGCCATTATTTACATTGGAGATCTGAAATGGACAGTGGAGGAAACTTTCTTCAGTGAAAGAGAGGAGAGAAAAGAAGCATCTGGATATAACCCAGTGGATCATGTAATTGCAGAAGTAGGAAAGTTGTTCTCTGACCATGGAAGCTCATCAAATGCTAAGGTATGGCTCATGGCAACTGCAAGTTACCAAACATACATGAGATGTCAAATGAGGCAGCCTCCTCTCGAAACCCAGTGGTCCTTTCAGGCAGTTCTTGTTCCTTCAGGTGGACTTGGCTTGAGCCTCCATGCTTCCAGTGTTCTTGAGTCAAAAGTGACCGTTTCCCAGAACTCATCTCATATGCTGGAAAAGAAACTCGTTAATAATAAGGAGGAGCAGGATAAGCTCACTTGCTGTGAAGAATGTGCCTCTAACTATGAAAAGGATGCTCAAATGTTCAAGCCAGGCCACACCAAATTCTTGCCTTCCTGGCTTCAGTCTCATAGCATTGAGGCCCATCAGAAGGAGGAATTAACCCAGTTGAGAAGAAAATGGAATAGACTATGCCAGTTTCTTCACCAAAGCAAGCATTCCCAGAACCACTGGAACAACAGTGTATACAGCAATTACAGTCCAAATGGGAAGATTTATCCTTATAATTCTTCATATCCCATGTGGTCAAAGCAAGGAAGTATTTTCCCAGATTCAAGTTGTATATCATTTGCAGACTCTGCAGCTAAATCCACTCATAGCTCCAATCTAGTACCCCGATTCCGACGCCAACAATCATGCACTATTGAGTTCGATTTTAGCAATGGAACTGAGAAACAGCAGCAAGCAACAGCTGAAGAACCGAGTTTGAAATCTCTTAAGGGCATGGAAGGTAAAGAAGTAACGATTACTCTTGCTCTTGGGAATTCCCAATTCGGAGGTTCAAAGCAAAGAGAGGAAAAGATGACTGATTCCACGACACACAGAAGGGCTCATGTTTGCAAACTATTGCAGGAGAATGTGCCATGGCAATCTGAAACAATCCCTTCAATAGCAGAGGCTTTGGTTGTTGATTCCCAATCAAAAAGGCAAAACCCAACTTCGTTGATTTTGAAAGGCAATGACTCTGTAGGGAAAATAAGATTGGCTCGTGCAATTGCTGAATCGTTCTTTGGTTCAGATGATCTGCTTCTTCAATTGGACATGAAGGAGACCTTAGAATCTCCACCATCTGAAGTGCTGAGTAGAGCTTTGGAAGCTCATGAAGAACTCGTCGTCTTAATCGAAAACATTAATTTCGCTGACACAGATTTCAAGAAATTCCTTGGAGACATTTATGAAACAGGAAAGTTCGGCCAGGCAATATTCATAGCCACAACCGGTAGCTCAACGATGAACGAAGAACAAAATCAAGATTCAGTGATGCAATTGACATTGCAGGTCAGCGAAACCAATCCAAACTTGGAGACACATTGCATCGTGGGCCAAAAGCGAAAAGCAGAATTCGATCTGTTCGCCAAAATTAAAAACCTTAGAACCGAAGACAAGGACGTTGAATCTAACAGAAAGAAAGACGTCTCGAGACAGTCAAGCTTCAACACCCTTGATCTGAACATGAAAGCCAATGAAGAAGAGGAAGACGACGACGACGGAGACGGCGGGAGTAGCGGGAGCCCGATTTCAAGCGATTTGACCCGTGAAACCATGCCAGATTCTACAAACCCGAATGGGTTTTTGGACTCAATCAAGAACCAATTCGAGTTCAATCGAAGTCCAGCTCGAGACAGAGAAATGGCGGAGCTATTCGCATGGAGAATCAAAGGGTGCTTTGAAGAACTTCACGGGAAGCAAAATGTGAGGAATTTCAGTATAGAAGAGAAGGTGATAGAGGAAGTAGTTGGTGGGTGTGGTAGTTTTACTAACAGAGTGTTTGAGAAATGGCTAAAAGACATTTTTCAAAGAAGCTTAGAAACAGGAAAGGAGAAAGAGGGTATAGGTTTTAGACTTTGTTGGGGTGGAAATGGTAAAGGTAAAGGAGGGGAAATTAGGATTTTGGATAGTGGAGAAGATGGGTTCATGAGTTCATGTCTGCCAAAGAGTATCAAAGTTAGCTACTTGATGGATTGA 3129 0.4414 MRSGGCALQQTLTSEAATVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSFRRACLKSHPHHQTSPHNSQFPLHCRALELCFNVALNRLPTTPTPNLLHTHHQPSLSNALIAALKRAQAHQRRGCIEQQNQQPLLTIKVELEQLVISILDDPSVSRVMREAGFSSTAVKSSIEDSSVSPPCSVFQCYSNSGGVFSSPCSPSPSENQRETINPNSFRHTHFYTTAPEYYNTVLFSPQKRTPVYPITEPALSKEDIKLILHVLLRRKKRNAVIVGDSVSITEGLVGELMGRLDKGEVPDELKSASFIKFHLAPVSLRSMKRDEVEMNLLELKRKVDSAASGGGGGAIIYIGDLKWTVEETFFSEREERKEASGYNPVDHVIAEVGKLFSDHGSSSNAKVWLMATASYQTYMRCQMRQPPLETQWSFQAVLVPSGGLGLSLHASSVLESKVTVSQNSSHMLEKKLVNNKEEQDKLTCCEECASNYEKDAQMFKPGHTKFLPSWLQSHSIEAHQKEELTQLRRKWNRLCQFLHQSKHSQNHWNNSVYSNYSPNGKIYPYNSSYPMWSKQGSIFPDSSCISFADSAAKSTHSSNLVPRFRRQQSCTIEFDFSNGTEKQQQATAEEPSLKSLKGMEGKEVTITLALGNSQFGGSKQREEKMTDSTTHRRAHVCKLLQENVPWQSETIPSIAEALVVDSQSKRQNPTSLILKGNDSVGKIRLARAIAESFFGSDDLLLQLDMKETLESPPSEVLSRALEAHEELVVLIENINFADTDFKKFLGDIYETGKFGQAIFIATTGSSTMNEEQNQDSVMQLTLQVSETNPNLETHCIVGQKRKAEFDLFAKIKNLRTEDKDVESNRKKDVSRQSSFNTLDLNMKANEEEEDDDDGDGGSSGSPISSDLTRETMPDSTNPNGFLDSIKNQFEFNRSPARDREMAELFAWRIKGCFEELHGKQNVRNFSIEEKVIEEVVGGCGSFTNRVFEKWLKDIFQRSLETGKEKEGIGFRLCWGGNGKGKGGEIRILDSGEDGFMSSCLPKSIKVSYLMD 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0903 1042 Gene3D - 648 848 IPR027417 -
Alju13g0903 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 655 968 IPR027417 -
Alju13g0903 1042 FunFam protein SUPPRESSOR OF MAX2 1 9 179 - -
Alju13g0903 1042 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 994 - -
Alju13g0903 1042 ProSiteProfiles Clp repeat (R) domain profile. 8 181 IPR004176 -
Alju13g0903 1042 MobiDBLite consensus disorder prediction 850 914 - -
Alju13g0903 1042 MobiDBLite consensus disorder prediction 889 914 - -
Alju13g0903 1042 Pfam Clp amino terminal domain, pathogenicity island component 140 175 IPR004176 -
Alju13g0903 1042 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Alju13g0903 1042 SUPERFAMILY Double Clp-N motif 12 174 IPR036628 -
Alju13g0903 1042 Gene3D - 245 432 IPR027417 -
Alju13g0903 1042 Gene3D - 9 177 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0903 Alju-ChrAlju13 27016254 27019851 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g0903 13 27016254 27019851 Alju13g0903 13 27016254 27019851 ECH