Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0793 ATGAATGTCAGTTTTAGGTATGAGGTGGTTGGTGATAACAGTAACGCTACCAAGGACAACCATAATGTTCCTAATGCCTTGACTACAAGGCGAAGTGTGCCAAGTTTTGCCAAGCAGTATTCTCCTCGAACTATTGATAAGGTAAAGGATCTTCATGAGGTTTTGCCTGCATCAAAGTCAGCACTGGCCAGCTCAATAGACATTCTATATCAGAAATTTGATGAAGAAAAGACAAATAGTCCAGTGCCTGACAAACCTGAACTGGATGACTGCTCTGAGGATCTTGAGCAAATCAAACCAAATGAATCTCATTTGACTGATTCTGGGAAAGAAAAATCTGAAGAGTGTGTTGGCAATGATGAAAAATGCAGCCCAGTTTCTGGCAATCCTGAAATTAATGTGTTTCAAGAGAAAATGGAACCTGTCCAATCTGATGGTGTTCTTAATGAAATCCCTGAAGAGTGCCAAGCTAGATTTTCTGTTGTTGATCAGGGCATAGAATTGTCATCAAATGAACCTCTTAACTCAGAGGCATCTACCACAAAGGCTCCTGATTCTGATGTTGATACCTATGATACTGCTGGTATCCAGTTACATTCTGATGTTGATACCCATGATACTGCTGGTATCCAGTTATCTTCTGAATATGCTATTACATGTGATCCCTTGGGTGAGGAAAATGACGATTCTAAGGAGAAGGTTATGCCCAACAAATTCACTTCTGAAGACGATGATTTTATCACTAAAGAGCTGCTCATGAAAGAATTGGAATCAGCTTTAAATAGTATCTCTGATTTGGAGACAGCTGCACTGGAATCTCCCAAAGATGATAAATATGTTGAAACCAGGTCTGAATGTAAAATGAGAAAATCACATAGCTTGGATGATGTTACAGAATCAGTTGCCAGTGAATTTTTAAGCCTGATAGGTGCTGACAATAGCCCATTTGGTTTGAGTTCTGAAAGCGAAGTCGAGTCCCCAAGAGAGCGCCTTTTAAGGCAATTTGAGAAGGAGGCTCTTGCTGAGGGTTTTTCCTTATTTGATTTTGAAATGGGTGATGATGAAGTTGACGACGACTATAATGCTCCGGTTGGGTCTGAGCAGTGGAACTTCTCTGAGGGCCCCTCCAGGTCATCATCACTGTTACAAGATCTTCTGCAGGAGGTGCATCCAGTTGAGTCTCAGGAAGTGAGGAGCAAACAAAGGGCTCAGATGGTAGAAGACTTGGAAACAGAAGCCTTGATGCGTGAGTGGGGTTTGAATGAGGATGCCTTTAAGCATTCTCCACCGAAATACCCTGCTGGTTTTGGAAGTCCCATTCACTCATCACCTGAAGAACCTCTTACTTTGCCTGCTCTTGCAGAGGGGTTAGGTCCCTTTCTGCAGACAAAGGATGGGGGATTTTTACGAACAATGGATCCCTCACTTTTCAGGAATGCTAAAAGCAGTGGAAGCTTGATTATGCAAGTATCCAATCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGTGTAATGGAGATTTTGCAGCGTTTGGCTTCATTGGGAATTGAAAAGCTCTCAATGCAGGCAAATAAGTTAATGCCTCTGGAGGATATCACAGGGAAGACAATGCAGCAAGTGGCATGGGAAGCTATGCCTCTCTTGGAGGGAACCGAGAGGCAATGTCTGTCACAGCATGATTTGGTGGCAGGGCAAGATACTAGTTCTGTGCAAAGTGGCTTGAAAGGAGCATCAATGGGACCAAAGACTTCAAAGTCTGATGCAAGTACATTAGGCAATCAAACAAGTTCAGAATTCACTTCATTGGAAGATCTTGCCCCGTTGGCTATGGATAAAATTGAAGCGCTTTCAATGGAGGGTTTGAGAATACAGTCTGGGATGTCCGATCAAGATGCACCATCAAATATCATTGCACAATCCATTGGGGATGTTTCAGCTCTCCAGGGCAAGGGGGCTGATATTAGTGGGTCTCTTGGCCTGGACGGAGCCGCAGGTTTACAGTTGTTGGATCTAAAAGACAGCAGTGATGGTGTTGAATCTGTTGATGGGATAATGGGCCTATCATTAACCCTGGATGAATGGATGAGGTTGGATTCCGGTGAGATCGATGATGCAGAGAATGTCAGTGATCATACTTCTAAACTTCTTGCTGCCCATCATGCTAACTCTTTTGACTTTATGCGTGGGACCTCGAAGGGAGAGAAAAAGAGAGGCAAAGGCAGAAAGTGTGGTTTGTTGGGAAATAATTTCACAGTAGCTTTGATGGTGCAACTGCGTGATCCTCTGCGAGACTATGAACCTGTTGGAACACCAATGCTCACTCTTATACAAGTCGAGAGGGTATTTGTCCCACCAAAGCCAAGAATGTACTGCAATGTGTCGGAGATAAGGAACAATAACGATGAAGATGATGAGCATGAAACTAGTGCTAAGTTGGAGTCAAAGGATGACAAGAAAGAAGAGAAAACCTCTGAAGAGGAGGGCATTCCTCAGTATAAGATAACTGAAGTCCATGTAGCTGGTCTGTCAACCGAACCCGAGCCTCACAAAAAGAAGCTTTGGGGTACTTCAACCAATGAAAAATCTGGCTCCCGTTGGTTACTTGCTAATGGAATGGGGAAGAGCAATAAGCATCCAATAATGAAGTCAAAAGTTGCGCCTAAATCTGGCGCTTTAACTACCACAAAAGTGCAGCCCGGTGATACATTGTGGAGCATATCATCTCGTGTTTATGGTTCTGGATCAAAATGGAAAGAATTGGCAGCTGTAAATCCGCATATCAGAAACCCCAACGTCGTTATATCAGATAAAACCATTAGATTGAAGTGA 2829 0.4327 MNVSFRYEVVGDNSNATKDNHNVPNALTTRRSVPSFAKQYSPRTIDKVKDLHEVLPASKSALASSIDILYQKFDEEKTNSPVPDKPELDDCSEDLEQIKPNESHLTDSGKEKSEECVGNDEKCSPVSGNPEINVFQEKMEPVQSDGVLNEIPEECQARFSVVDQGIELSSNEPLNSEASTTKAPDSDVDTYDTAGIQLHSDVDTHDTAGIQLSSEYAITCDPLGEENDDSKEKVMPNKFTSEDDDFITKELLMKELESALNSISDLETAALESPKDDKYVETRSECKMRKSHSLDDVTESVASEFLSLIGADNSPFGLSSESEVESPRERLLRQFEKEALAEGFSLFDFEMGDDEVDDDYNAPVGSEQWNFSEGPSRSSSLLQDLLQEVHPVESQEVRSKQRAQMVEDLETEALMREWGLNEDAFKHSPPKYPAGFGSPIHSSPEEPLTLPALAEGLGPFLQTKDGGFLRTMDPSLFRNAKSSGSLIMQVSNPVVVPAEMGSGVMEILQRLASLGIEKLSMQANKLMPLEDITGKTMQQVAWEAMPLLEGTERQCLSQHDLVAGQDTSSVQSGLKGASMGPKTSKSDASTLGNQTSSEFTSLEDLAPLAMDKIEALSMEGLRIQSGMSDQDAPSNIIAQSIGDVSALQGKGADISGSLGLDGAAGLQLLDLKDSSDGVESVDGIMGLSLTLDEWMRLDSGEIDDAENVSDHTSKLLAAHHANSFDFMRGTSKGEKKRGKGRKCGLLGNNFTVALMVQLRDPLRDYEPVGTPMLTLIQVERVFVPPKPRMYCNVSEIRNNNDEDDEHETSAKLESKDDKKEEKTSEEEGIPQYKITEVHVAGLSTEPEPHKKKLWGTSTNEKSGSRWLLANGMGKSNKHPIMKSKVAPKSGALTTTKVQPGDTLWSISSRVYGSGSKWKELAAVNPHIRNPNVVISDKTIRLK 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0793 942 CDD LysM 896 934 IPR018392 -
Alju13g0793 942 SMART LysM_2 894 942 IPR018392 -
Alju13g0793 942 MobiDBLite consensus disorder prediction 566 596 - -
Alju13g0793 942 MobiDBLite consensus disorder prediction 99 119 - -
Alju13g0793 942 Gene3D LysM domain 883 942 IPR036779 -
Alju13g0793 942 MobiDBLite consensus disorder prediction 99 129 - -
Alju13g0793 942 MobiDBLite consensus disorder prediction 169 187 - -
Alju13g0793 942 Pfam LysM domain 896 934 IPR018392 -
Alju13g0793 942 MobiDBLite consensus disorder prediction 797 830 - -
Alju13g0793 942 MobiDBLite consensus disorder prediction 796 830 - -
Alju13g0793 942 MobiDBLite consensus disorder prediction 169 191 - -
Alju13g0793 942 ProSiteProfiles LysM domain profile. 893 941 IPR018392 -
Alju13g0793 942 Coils Coil 249 269 - -
Alju13g0793 942 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 935 IPR039614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0793 Alju-ChrAlju13 25269866 25272796 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g0793 13 25269866 25272796 Alju13g0793 13 25269866 25272796 ECH