Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g2063 ATGTGCGTTCTCAACGAGGACAACATTATCATTAAGACGACAATCAGGAAGGAATGGGGAAGGAGCTACCCGGAGATTGGGGAAGAAACAGTGATCGGAATTGAGGAAGAGAGAAGAACACAGGAAATTCCTCCATCCCATTCTCTCTCTCTGATCGAGCTATTCATTTCAATTCCCAAAGCTGACTACGAGCACATTTCATATGGAATTCGTTTGTTGATTTGGGGAATTCAAATGGAAAGCCACAGGTTGAAAGAATACAATGGAAATAACCATCAGTTTTTGTCTGAATATGATGATCTCGTCTTAGATCGATGCGTATCCGATAGAAAGCATAGCCCGCCCCTTCCACCCACTGCATTTCCTCCTAGCCTAGGCTACATCCAACACCCTGTCTCAAAACTGGACACACTCGCTGGAATCGCAATCAAGTACGGCGTCGAGGTATCAGCCATCAAAAGAATGAATGGCCTCGCTACAGACCTTCAGATGTTTGCTCTTAAAACTCTTCACATACCACTTGGGGGAAGACACCCTCCATCAGATGATTCTACTACTTCAGGAAACAAAACACCAGATGATCTGTTCGATTCGCAACATTCTTTGACAGCGAATTCTCCCCAGCGGAAGGCCTCCCCTGTTGGGAACTCTTTGCAAGGTTTCTATAGAATAAAACCAGCGGACCAGAAAACCATATCCGATGACTTGCAGGTGGCAGGGAACAGAAAAGGGGCTTCTAATTTCTCTGAAGACTCGGCTTCACCCCTCCAACCTCCGAGTCGTCACCGAAAATCCAGAAGTCTAGTTGATATCATTTTGAGTGAGATTAAGGAGCAGCATGATATTGTGCCCGCTACACCAGAGACGCTCTTGAGGGAGGATAATAGCAGCAGCTGCGGATTCCCATCAAGAACAGGAAAAGGTTTGGCCCTCAGACAGAAATCAGCAAGCCGAGCTTCATTAATCACAGATTCTGAAGCTAGTGGCTCAAATTCTGGGCCAATTGGTTTGGACGATATATTCCCAACTGTTGGTACCCTTGGTGTTAAGAAATCATCAAGCACATCATGCTTACATGACGAAGGCAGTAGCCCCACATCTATCTGGCCAACTTCAAAATGGAGTTTGAGATCAGATTTTCAGGCCTTTGCAGCTGCAAAACCAATATTTGATGGCTTGCCCAAACCCACAACTGGTCGCAGAAATAAAGCTGCACTCGATAAACATATATAG 1233 0.4542 MCVLNEDNIIIKTTIRKEWGRSYPEIGEETVIGIEEERRTQEIPPSHSLSLIELFISIPKADYEHISYGIRLLIWGIQMESHRLKEYNGNNHQFLSEYDDLVLDRCVSDRKHSPPLPPTAFPPSLGYIQHPVSKLDTLAGIAIKYGVEVSAIKRMNGLATDLQMFALKTLHIPLGGRHPPSDDSTTSGNKTPDDLFDSQHSLTANSPQRKASPVGNSLQGFYRIKPADQKTISDDLQVAGNRKGASNFSEDSASPLQPPSRHRKSRSLVDIILSEIKEQHDIVPATPETLLREDNSSSCGFPSRTGKGLALRQKSASRASLITDSEASGSNSGPIGLDDIFPTVGTLGVKKSSSTSCLHDEGSSPTSIWPTSKWSLRSDFQAFAAAKPIFDGLPKPTTGRRNKAALDKHI 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g2063 410 MobiDBLite consensus disorder prediction 241 265 - -
Alju12g2063 410 MobiDBLite consensus disorder prediction 180 215 - -
Alju12g2063 410 CDD LysM 136 172 IPR018392 -
Alju12g2063 410 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 112 336 IPR045030 -
Alju12g2063 410 Pfam LysM domain 132 173 IPR018392 -
Alju12g2063 410 SUPERFAMILY LysM domain 128 173 IPR036779 -
Alju12g2063 410 Gene3D LysM domain 121 185 IPR036779 -
Alju12g2063 410 ProSiteProfiles LysM domain profile. 128 172 IPR018392 -
Alju12g2063 410 MobiDBLite consensus disorder prediction 241 261 - -
Alju12g2063 410 MobiDBLite consensus disorder prediction 175 217 - -
Alju12g2063 410 MobiDBLite consensus disorder prediction 293 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g2063 Alju-ChrAlju12 41452451 41455255 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g2063 12 41452451 41455255 Alju12g2063 12 41452451 41455255 ECH