Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1994 ATGAAGCTCTGGCAGAGACTCGCCGGAGCTCTGAAAGACAAGAACAGCGTGTGGGCGGCTCAGCTGTCTCGCCGCACCTCCTTCCGCAACCCCGATCTGGAAGCCGCCGTCATCAAAGCCACCAGCCACGATCGATATCGCATCGACTGCAAAAACGTTCAACGTGTCTTCCAATGGGTTCGAACCTCTCCTCTATACCTCAAACCCCTAATTTGGGCTCTCGCCATGCGAATGCAAAAGACTCGAAGCTGGATCGTCGCCCTTAAGGGTTTGATGCTCATGCACGGCATTTATTGCTGTGATCTCGCCGCTATCCGAAAGATGGGTCGATTGCCCTTCGATCTCACCCATTTCTTCGATGAGCATCTTAATCCATACAAGGCTGTTGCTTATAACGCGTTTGTTTGTTCCTATTTTGCGTATTTGGACCAGAAATCCGCCTTCGTATGCATGGAATTTCATAAACAGAACAAACAGGGCAAGAAAGCAGAGGAAACGTTGATTGAAGAATTGGAGAAATTGCAGGCGATGCAGGATTTGATTGACATGCTGCTTCGGATTAAACCTGATAATTTGAATTCGCGTGAGGGGCTCATTCTGGAAGCCATGGATTGCGTCATTGTGGAGCTTTTCGACGTGTACAGTAAATTCTGCAAAGGGATTGCTCGAGCTCTCTTGAGGATATATGATATTGGCGGGAAGATGGAAGCTAGCGTTGGGCTTAAGGTTCTTCAGAAAGCAGCAATCCATAGCGGTCAGCTTTCTATATACTTTGATTTCTGCAGGGAAATTGGAGTCCTCAACGCTTCTCAATGTCCCAAAATGGAGCGATTCCCCGAAGGATATATCCAAGATCTGGAGAGAATCATCAATGGGGTTGATGAGAAGGAAAGTTTGAAGGGTGATCATGAAGAAGACAAGGCCTTTGTGCCCTGTGTTAATGCCATTGTCTGCAAGGATGAACACAAGGGATCAGATGGTTTGAAGACGGTAATTACAGAAAAGTGGGAGGTTTTTGATGATCAAATGGTGTTTGATGATAGAACAAAGCCTAATTTCTCAACAAACCCTTTCGAAGATTCATATACATATAGCATCGTTCCCTACCAAGCAGTTCATAACCAAGTTCTTCCGGATTTAATTAGTTTTTAG 1152 0.4566 MKLWQRLAGALKDKNSVWAAQLSRRTSFRNPDLEAAVIKATSHDRYRIDCKNVQRVFQWVRTSPLYLKPLIWALAMRMQKTRSWIVALKGLMLMHGIYCCDLAAIRKMGRLPFDLTHFFDEHLNPYKAVAYNAFVCSYFAYLDQKSAFVCMEFHKQNKQGKKAEETLIEELEKLQAMQDLIDMLLRIKPDNLNSREGLILEAMDCVIVELFDVYSKFCKGIARALLRIYDIGGKMEASVGLKVLQKAAIHSGQLSIYFDFCREIGVLNASQCPKMERFPEGYIQDLERIINGVDEKESLKGDHEEDKAFVPCVNAIVCKDEHKGSDGLKTVITEKWEVFDDQMVFDDRTKPNFSTNPFEDSYTYSIVPYQAVHNQVLPDLISF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1994 383 CDD ANTH_N_AP180_plant 33 148 - -
Alju12g1994 383 Gene3D - 7 153 IPR008942 -
Alju12g1994 383 Pfam ANTH domain 32 291 IPR011417 GO:0005543
Alju12g1994 383 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Alju12g1994 383 SUPERFAMILY GAT-like domain 169 292 - -
Alju12g1994 383 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 304 IPR045192 GO:0048268|GO:0072583
Alju12g1994 383 SUPERFAMILY ENTH/VHS domain 32 148 IPR008942 -
Alju12g1994 383 FunFam Putative clathrin assembly protein 7 153 - -
Alju12g1994 383 Coils Coil 157 177 - -
Alju12g1994 383 Gene3D ANTH domain 155 303 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1994 Alju-ChrAlju12 40913027 40914178 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1994 12 40913027 40914178 Alju12g1994 12 40913027 40914178 ECH