LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju12g1972	ATGGCAATGCCATCGGGAAATGTGGTAATTCCGGACAAAATGCAGTTTCCAAGCGGTGGCGGTGGCGGGGCTGGCGGTGGTGGCAGTGAGATTCACCAGCATCCCTACCGCCAACAATGGTTTGTCGATGAGCGGGATGGATTTATCAATTGGCTGCGCAGCGAATTCGCTGCTGCAAATGCAATTATCGACTCTCTTTGTCACCATTTACGGGCAATTGGTGACCCGGGTGAGTATGACATGGTCATTGGGACCATTCAGCAAAGGCGGTGCAATTGGAATCAGGTGCTTCTTATGCAGCAGTACTTTTCGGTGGCGGAAGTGGGATATGCACTCCAGCAAGTAGCATGGAGGCGACAACCGAGATATTTGGATCCAGTAAAAGTGGGTGCAAAGGAATACAAGAAATCTGGTTTTGGTTATAATAAGCATCAAGGGCATAGGTTTGAGGCAGCAAAGGAAGGACATAATTCCTATGCAGAATCTTTCAGTCACGAAGGCAATTCTCTAGTTACTGAAGTCTCTGGCAAAGGGGCTCCACTAACTGACAAACAAGAAGAACATAAATCAGGTGGCAAGTCTGAAAAGATGGATGATAAGAGTTTACCGTCTTCTGATGAAAAAAAAGATGCTATAACAACGCTTCAAAATGATGGAAGCTTGAAAAGTGCAGGGCATTCTACGGGATCTCTGCCTAACTCAGAATCTGAAGCTGTGGTTGTAAATGACGGAGTTATATCAGATTCTAAAGAGGATGACTCACATTTTACGCAAAATCATCATCAGAATCAAGCAAAGACTTTTGTTGGCAATGAGATGTTTGATGGGAAGACGGTGAATGTGGTTGATGGACTGAAATTATATGAAGGTTTATGCGATGGCAATGAAGTCTCAAAACTTGTTTCACTGGTAAATGAACTGAGGGCTGCTGGAAAAAGAGGACAATATCAAGGAACACAGACATATGTGGTTTCAAAAAGGCCAATGAAAGGTCGCGGAAGGGAGATGATTCAATTGGGTGTCCCTATTGCGGATGCACCACCAGATGGGGAAAATCTGACAGGAGCCTCCAAAGATAAAAAAGTAGAACCTATCCCTGCCTTGTTTCAAGATATTATTGAGCGCTTGGTAGCCTCGCAAGTTATGATTGTGAAGCCTGATGCTTGCATTGTGGATTTTTACAACGAGGGTGATCACTCGCAGCCCTACAATTGGCCATCTTGGTTTGGAAGGCCTGTTTACGTGCTTTTGCTGACAGAATGTGACATGACATTTGGGAAACTTATTGCCTCAGATCATCCTGGCGATTATAGAGGCACTTTCAAGCTTTCTCTTGAACCTGGGTCCCTTCTGGCAATGCAAGGAAGATCTGCTGATTTTGCTCGACATGCCCTTCCCTCTATTCGTAAACAACGCATACTTGTTACTTTTGCCAAGTCCCAACCAAAAAAATCATTGCCTAGTGATGCTCAACGTCTTGCTTCATCTGCTGCATCCTCTCATTGGGGCCCACCACCCAGTAGATCTCCCAATCATATACGTCATCATTTAGGCCCCAAGCATTATGCACCAGCTCCAACGACCGGTGTACTGCCAGCTCCACCCATTTGTGCACCTCCGAACGGCATACAGCCGTTGTTTGTGCCTGCACCAGTTGCACCCCCCATGCCTTTTCCTGCACCAGTTCCTCTCCCACCAGGGTCTACTGGATGGACAGCGGCTCCTCCAAGGCATCCTCCTCCGCGAATTCCTGTTCCGGGCACTGGAGTCTTCCTTCCTCCACCAGGCTCGGGCAATTTGTCTCAAGCATTATCGGCTCCCTTGACTGAGATGAACTCTAGTGTAGAGAATGCAACCCTACCAGAAAAAGAAAATGGGAAGTCGAATCATAACAACGCGAGTGCTTCCCCAACAGCAACAGTGGATGGACAGATGCAAAGGCAAGAATGCAATGAAAATGGAACTTTGGGTGAAACTGAAGGTGAGCGGGCTGTTGAGAAAGAGCAGGAAAGCAACGACAAAGTTGGGGTGAGCCATTAG	2040	0.4681	MAMPSGNVVIPDKMQFPSGGGGGAGGGGSEIHQHPYRQQWFVDERDGFINWLRSEFAAANAIIDSLCHHLRAIGDPGEYDMVIGTIQQRRCNWNQVLLMQQYFSVAEVGYALQQVAWRRQPRYLDPVKVGAKEYKKSGFGYNKHQGHRFEAAKEGHNSYAESFSHEGNSLVTEVSGKGAPLTDKQEEHKSGGKSEKMDDKSLPSSDEKKDAITTLQNDGSLKSAGHSTGSLPNSESEAVVVNDGVISDSKEDDSHFTQNHHQNQAKTFVGNEMFDGKTVNVVDGLKLYEGLCDGNEVSKLVSLVNELRAAGKRGQYQGTQTYVVSKRPMKGRGREMIQLGVPIADAPPDGENLTGASKDKKVEPIPALFQDIIERLVASQVMIVKPDACIVDFYNEGDHSQPYNWPSWFGRPVYVLLLTECDMTFGKLIASDHPGDYRGTFKLSLEPGSLLAMQGRSADFARHALPSIRKQRILVTFAKSQPKKSLPSDAQRLASSAASSHWGPPPSRSPNHIRHHLGPKHYAPAPTTGVLPAPPICAPPNGIQPLFVPAPVAPPMPFPAPVPLPPGSTGWTAAPPRHPPPRIPVPGTGVFLPPPGSGNLSQALSAPLTEMNSSVENATLPEKENGKSNHNNASASPTATVDGQMQRQECNENGTLGETEGERAVEKEQESNDKVGVSH	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	173	238	-	-
	Alju12g1972	679	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	39	635	IPR044842	GO:0003729\|GO:0006402\|GO:0032451
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	594	679	-	-
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	479	526	-	-
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	598	655	-	-
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	180	213	-	-
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	214	237	-	-
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	481	506	-	-
	Alju12g1972	679	SUPERFAMILY	Clavaminate synthase-like	275	477	-	-
	Alju12g1972	679	MobiDBLite	consensus disorder prediction	659	679	-	-
	Alju12g1972	679	Gene3D	-	269	486	IPR037151	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju12g1972	Alju-ChrAlju12	40756507	40763050	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju12g1972	12	40756507	40763050	Alju12g1972	12	40756507	40763050	ECH