Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1971 ATGCCTGCAATTAGCAAGCTTAATTGCAGATTTTACATGTTGAAATATTCCACCTACAAGCAAGCTTGTCACTTATCAGTCTGTGAGAAGCTTTGCATTTTGCGAGAAGATACATTGCATCTACTCATAGATAATCCGGGCGTATATACTAATATACGTTGCATCTTTCACTTTCCAGTTTCCTCAGACATTCGAATACGAATTCAACGACTATTTGGCTTATCAGCGCCTGAATTCCGGAATCTAGTGGTATTGTTGAATCTTCCAGATATGGCAGCTACTATGCCCTCTCACATTTCGCTTGTTCAACCCAATCGTTCTCTGAATCTCAGAACTCACCAGTTTCCTCGCGTGGTTCAGAATCTCCGAATTCGGCCTACTTTCTCAATTGTGCGGTATTTGGCCAAAATGGAGAATGGGTTCGTCCCAAAAGCCTCGGCGGGTGTCCTCACATCGAATTCTGACTCTCAAGTTTCAGTCACAGCGGCTAGTAGTCCGATTATTGTCATTGACAATTACGACAGTTTTACCTATAATCTTTGCCAGTACATGGGAGAGCTGGGATTTCGCTTTGAAGTATACCGCAATGATGAATTAACAGTTAAGGAGTTAAAGAGGAAAAATCCTAGAGGTGTGCTAATATCACCTGGTCCTGGCATACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAACTTGGTCCAACGGTACCTTTGTTTGGTGTGTGCATGGGCTTGCAATGTATTGGAGAGGCTTTTGGTGGAAAGATTGTGCGTTCTCCTCAAGGTGTTATGCATGGAAAAAGCTCTTTGGTGTATTATGATGAGAAGGGAGAAGATGGATTATTGTCTGGGTTACCAAACCCTTTCACTGCTGGTAGATATCATAGCCTTGTAATTGAAAAGGAGAGTTTTCCTCATGAAGAACTTGAGGTAACAGCCTGGACAGAGGATGGTCTTATAATGGCTGCCCGTCATAAGAGATATAAGCATTTGCAGGGGGTTCAATTTCATCCAGAGAGCATTATAACCACCGAAGGCAGGACGATTGTCGGCAATTTTGTCAAGCTTATAGAGAAGAAGGAGGCTGAGGCTCTCACAAAATGA 1110 0.427 MPAISKLNCRFYMLKYSTYKQACHLSVCEKLCILREDTLHLLIDNPGVYTNIRCIFHFPVSSDIRIRIQRLFGLSAPEFRNLVVLLNLPDMAATMPSHISLVQPNRSLNLRTHQFPRVVQNLRIRPTFSIVRYLAKMENGFVPKASAGVLTSNSDSQVSVTAASSPIIVIDNYDSFTYNLCQYMGELGFRFEVYRNDELTVKELKRKNPRGVLISPGPGIPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPQGVMHGKSSLVYYDEKGEDGLLSGLPNPFTAGRYHSLVIEKESFPHEELEVTAWTEDGLIMAARHKRYKHLQGVQFHPESIITTEGRTIVGNFVKLIEKKEAEALTK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1971 369 PRINTS Glutamine amidotransferase superfamily signature 239 250 - -
Alju12g1971 369 PRINTS Glutamine amidotransferase superfamily signature 212 221 - -
Alju12g1971 369 PRINTS Glutamine amidotransferase superfamily signature 335 348 - -
Alju12g1971 369 PRINTS Anthranilate synthase component II signature 167 181 - -
Alju12g1971 369 PRINTS Anthranilate synthase component II signature 288 300 - -
Alju12g1971 369 PRINTS Anthranilate synthase component II signature 212 221 - -
Alju12g1971 369 PRINTS Anthranilate synthase component II signature 335 348 - -
Alju12g1971 369 PRINTS Anthranilate synthase component II signature 265 273 - -
Alju12g1971 369 PRINTS Anthranilate synthase component II signature 239 250 - -
Alju12g1971 369 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 167 357 IPR006221 -
Alju12g1971 369 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 166 365 - -
Alju12g1971 369 Gene3D - 165 358 IPR029062 -
Alju12g1971 369 FunFam Anthranilate synthase beta subunit 1 165 358 - -
Alju12g1971 369 Pfam Glutamine amidotransferase class-I 169 356 IPR017926 -
Alju12g1971 369 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 155 363 - -
Alju12g1971 369 CDD GATase1_Anthranilate_Synthase 167 356 IPR006221 -
Alju12g1971 369 SUPERFAMILY Class I glutamine amidotransferase-like 167 361 IPR029062 -
Alju12g1971 369 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 239 255 - -
Alju12g1971 369 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 209 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1971 Alju-ChrAlju12 40737262 40741288 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1971 12 40737262 40741288 Alju12g1971 12 40737262 40741288 ECH