Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1947 ATGCCTCCATGCCCACCCACAAGATGCATAGATGCCAACGGGGAACATACTGATCAACCAGCATCTAATTGGACAATCCATGTTTCAGATGTAAGAACAGTCAAGGTTAGCAACATATCACTGGCAACTTCTGTGAAGGATATAAGAGATTTCTTTTCATTTTCGGGTGACATTCAATATATCGAGATGCTAAGGGAAAGTGAAAGGACTCAGGCTTCATATGTTACCTTTAAGGAATCAAAGGAAGCAGACACAGCAGTGTTATTGACGGGAGCCAGCATAGGTGATCACTGTGTCACCATCACACCCGTTGAGGACTACCAGCTGCCTCCTCATGTTCTTCCTTCAGGACCAAAAAAGCCAACACCTGCGGCAGTTAAGAAAGCCGAAGATGTGGTAAGCACCATGCTTGCCAAGGGTTTCATTGTAGGAAAGGATGCAATCAACAGGGCAAAATCCTTTGATGAACGCCATTGCTTGACTTCAAATGCTTCCGCCACAGTAGCTTCCATTGATCACAAAATGGGTTTAAGGGATAAACTAAGCGTTGGAACAGGCATACTGAATGATATAGTGAAAGAGATGAATGACAAACTTCTAATCTCTGAAATGACCAAGTCTGCTTTTGCTGCTGCTGATAGTGCTCGATCCGCTGTCATGAGCAATTCTTACTTGTTAACTGGTGCTTCATGGCTGTCAAGTGCCTGTACTGTTATTGCAAATGCAGTTGGAAATGTGAGCATGATGACCAAAGAGAAGGTTGAAGAGGCTGATAAATATGGGAGGACGGACTCTGATGGGGGTCTTCCTGTGTTTTCTGTTCATTCGGGCAGAGCTCATATGTGA 846 0.4421 MPPCPPTRCIDANGEHTDQPASNWTIHVSDVRTVKVSNISLATSVKDIRDFFSFSGDIQYIEMLRESERTQASYVTFKESKEADTAVLLTGASIGDHCVTITPVEDYQLPPHVLPSGPKKPTPAAVKKAEDVVSTMLAKGFIVGKDAINRAKSFDERHCLTSNASATVASIDHKMGLRDKLSVGTGILNDIVKEMNDKLLISEMTKSAFAAADSARSAVMSNSYLLTGASWLSSACTVIANAVGNVSMMTKEKVEEADKYGRTDSDGGLPVFSVHSGRAHM 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1947 281 SMART rrm1_1 33 102 IPR000504 GO:0003723
Alju12g1947 281 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 32 257 - -
Alju12g1947 281 SUPERFAMILY RNA-binding domain, RBD 18 108 IPR035979 GO:0003676
Alju12g1947 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 99 IPR000504 GO:0003723
Alju12g1947 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Alju12g1947 281 Gene3D - 28 102 IPR012677 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju12g1947 Alju-ChrAlju12 40485294 40487848 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1947 12 40485294 40487848 Alju12g1947 12 40485294 40487848 ECH