Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1938 ATGGATGATGAGCGATCACTAACTCAAACCTCTGATTTGATTCATGCAAATTTGTGGTGCATGCTTGATTACTATTCTGGCAAGTGTATTAAATTTTTGCCAAGAATATCATGGTGTTTGGTTATTGTCTTGTTGTTGGATCATTATATGTTTAAAGCGTTTTCTTTTCTTTTCTTTTCTGCTTTGGTGCTTTTCTGGGTTGCTCTAAAATTTGCTCCTGGAAATTTTAAAGAATTGGCATTTAGGATGGGTAGAACAATTGAGCTGCGTGGATTCCCTTGTGACGTTTCTGTGTCCAGAGTTAAGCAATTTGTAGAGCAGATTACTGGTGAAGGTACTGTCTTTGCTATTAAGATAAGGCAAGGCAGAGGTAATGTTCCAAGAGCATTTGTTATCATTCAATTCGAAGATGCAGAGAAGGCTTCTGACCTTATTTCCTTGTCGAACAAGAGCATACGGTATGGGCAATCCTACCTTAAGGCTCGAGCACTGGAAAAAGATATCGTGCCAAAGCCAAGAACATTTTTGCATAGCTTGGAGGATGTGAAACTGCATTTTGGCTGCCAGATCTCGAAGGAAAGATTCCATGTTTTATGGGAATCAGTTACTAAGCAAGTGAACTTGGGGATTGGAATGAGAAAGATACAGTTCCTTCTGTCCTATGGACTGGCGGATTATAAGCTTGAACTTTCCTATGAGAACATTTGGCAGATTGAGCTGCACTGTCCACCTGATGAAACTGCAATGTATCTTCTGATTCAGCTATTCGGTGCTCCTCGAGTATTTGAGAAAGATGCGCGTACTTCAGGAAGTATATTTGAAGATCCTTTTCTCAACTTTTGCAAAGATAGTTCTGATGATCAGTGGATCCGGACAGTAGATTTCACTCCTTTTACCTGTATTGGGCAGTCTTCTCATATATACTTGCAGCTTCCCTCTCGTGGACATATTCAATATTTCAGGGAAAACTTCCCTTATTATAAGGAAAGTGAGAGGAAGTTCTCTTTGGAGGAAGGAAGTCACTTTTCTAGCAATCTGAATCTAGTCCCTATTGTTGCTCCTCCTCATGGAATTGACATACCATATGACATCCTGTTCAAAGTTAACTCAGTGCTTCAGCATGGGTGTCTTTCAGGTCCAGCAATAGATAGTGGCTTCTATCGTTTGATTGATCCACGTAGGATGCCTCGTGCTTTCGTTGAACATGCATTAGAGAAAATGTATTTTTCAAAGGAATTCTGCTCTGACCCCTCAAAGTGGATGACTGATCAGTTCAGAAAGTACGGTGCATCACAGTATCGTTCCCAGTCACCTTCCATACCCTTAGACGATGGCTTGGTATATGTTCGCAGGGTTCAGATTACCCCTTGTAAAGTGTATTTTTGTGGCCCAGAGGTCAATGTCTCAAATCGTGTCCTTCGCCATTTCCATGAGGTCCTTGATAACTTCCTACGTGTTTCATTTGTTGACGAGGAGCTGGATAAACTGTTTTCAACAGATTTATCTCCACGCAACTCTTCTAGTGAACAAAGAAAAACTGAGATCTATACAAGGATTCTTTCCATTCTTCAAAATGGCGTAGTAATTGGTGATAAAAAGTTTGAATTTCTAGCATTCTCATCAAGTCAGTTGCGGGAGAATTCTTTATGGATGTTTGCTCCTGCAGATGAACTTAATGCTGCTGCCATTAGAGATTGGATGGGGAATTTTCGCAACATCAGAAATGTAGCTAAATATGCTGCTAGGCTGGGTCAATCTTTTGGTTCATCTACTGAAACTTTAAGTGTTAAGCGGGATGAAACTGAGATGATTCCTGATGTGGTGGTTAAAAATGGTGATATTGACTATGTTTTCTCTGATGGGATTGGGAAGATTTCTGCTAACTTTGCCAAGAAAGTGTCTATAAAATTTGGGTATAAATCATCCACCCCTTCTGCCTTTCAGATTCGATATGGTGGGTATAAAGGGGTTGTGGCTGTTGACCCAACATCATCAGTGAAATTATCGCTGAGGAAGAGCATGCTCAAGTATGATTCAGATAATACAAAACTAGATGTCTTGGCATGTAGTAAATTTCAGCCTTGTTATCTGAATCGGCAGATAATCACACTCTTATCTACTCTTGGTGTCAAGGATCATGTTTTTGAGAAGAAGCAGAAGGAAGCTGTAAACCAGCTCAACTCATTACTAACAGATTCATTAGAGGCTCAGGAGGCTTTGGACTCGATGTCTCCTGGGGAGATATCTAATATTCTGAAGGAGATGCTCATCTGCGGTTATATGCCTGATGCGGAACCTTTTCTTTCAATGATGCTGCAAACATTCAGGGCATCAAAATTATTGGAAATACGACGCAAATCTAGAATTTTTGTCCCACAAGGAAGAGCAATGATGGGATGTCTAGATGAAACAAGAACCTTGGAATATGGTCAAGTATTTGTGCAGTATTCTGATAAAAGGTCCCTGCCATTGTCTAATGATTCTGCTGCCTATGGCTCTGGGAGACCTTATATAGTTACAGGTAAGGTGGTTGTTGCAAAAAACCCATGCTTACATCCCGGTGATGTACGTGTTTTGGAGGCTGTTAATGTGCCAGCTCTTCATCACATGGTCGATTGTGTTGTTTTCCCGCAAAAAGGATCCAGGCCTCATCCCAATGAGTGTTCGGGAAGTGATCTAGATGGAGACATCTACTTTGTTTGTTGGGACCCCGAATTAATTCCACCTCGCCAAATCCCACCGATGGATTATACTCCAGCCCAAACTATACGGTTGGATCATGAAGTCATGATAGAGGAGGTTGAGGAATACTTTGCCAACTATCTTGTCAATGACAGTCTAGGAATAATTGCAAATGCCCACACTGTCTTCGCAGATAGAGAGCCCAAGAAGGCAATGGCTGCACCATGCATTGAGCTTGCAAAGCTATTTTCGATTGCCGTTGACTTTCCAAAAACCGGTGTCCCTGCTATTATACCTCATGAACTATATGCCAAAGAATATCCAGACTTCATGGAGAAACTTGATAAACCCACCTACGAATCAATGAATGTGATCGGAAAGCTTTTTAGGGAAGTGAAGGAAATTGCACCAGAAGGCCACTCTTCTCCAGCGTTCACTCTGGAAATTGCTGAAAGGTCATATGACCCTGATATGGAAGTCGATGGCTTTATGGATTATGTTGATGATGCTTTCTATCACAAAAGCAACTATGACTTCAAGCTGGGGAATTTGATGGATTATTATGGCATCAATACTGAGGCTGAAATCATAAGTGGGAATATTATAAGAATGTCCAAATCTTTTACCAAAAGAAGGGATGCAGAAGCAATCACAATGGCTGTGAGATCCCTAAGAAAAGAAGCTAGGACCTGGTTCAACAGCCATGGGAGTGCAGAAGATTCTCGGGAGGACGACGTGGATGCAAAAGCATCTGCTTGGTACTATGTTACCTATCATCCAAGTTATTGGGGTCGCTACAATGAAGGTTTGAACCGACATCACTTTCTAAGCTTCGCATGGTGTGTTTATGATAAGCTTGTCACAATCAAGAAGTACAAAGCCAGCATTAGAAGGTCTCTTCAACTATCTTCCTTGGAACATGGGTTTCGAAGTGGGCTGCATTTGTATTGA 3633 0.4123 MDDERSLTQTSDLIHANLWCMLDYYSGKCIKFLPRISWCLVIVLLLDHYMFKAFSFLFFSALVLFWVALKFAPGNFKELAFRMGRTIELRGFPCDVSVSRVKQFVEQITGEGTVFAIKIRQGRGNVPRAFVIIQFEDAEKASDLISLSNKSIRYGQSYLKARALEKDIVPKPRTFLHSLEDVKLHFGCQISKERFHVLWESVTKQVNLGIGMRKIQFLLSYGLADYKLELSYENIWQIELHCPPDETAMYLLIQLFGAPRVFEKDARTSGSIFEDPFLNFCKDSSDDQWIRTVDFTPFTCIGQSSHIYLQLPSRGHIQYFRENFPYYKESERKFSLEEGSHFSSNLNLVPIVAPPHGIDIPYDILFKVNSVLQHGCLSGPAIDSGFYRLIDPRRMPRAFVEHALEKMYFSKEFCSDPSKWMTDQFRKYGASQYRSQSPSIPLDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEVLDNFLRVSFVDEELDKLFSTDLSPRNSSSEQRKTEIYTRILSILQNGVVIGDKKFEFLAFSSSQLRENSLWMFAPADELNAAAIRDWMGNFRNIRNVAKYAARLGQSFGSSTETLSVKRDETEMIPDVVVKNGDIDYVFSDGIGKISANFAKKVSIKFGYKSSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMLKYDSDNTKLDVLACSKFQPCYLNRQIITLLSTLGVKDHVFEKKQKEAVNQLNSLLTDSLEAQEALDSMSPGEISNILKEMLICGYMPDAEPFLSMMLQTFRASKLLEIRRKSRIFVPQGRAMMGCLDETRTLEYGQVFVQYSDKRSLPLSNDSAAYGSGRPYIVTGKVVVAKNPCLHPGDVRVLEAVNVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPPRQIPPMDYTPAQTIRLDHEVMIEEVEEYFANYLVNDSLGIIANAHTVFADREPKKAMAAPCIELAKLFSIAVDFPKTGVPAIIPHELYAKEYPDFMEKLDKPTYESMNVIGKLFREVKEIAPEGHSSPAFTLEIAERSYDPDMEVDGFMDYVDDAFYHKSNYDFKLGNLMDYYGINTEAEIISGNIIRMSKSFTKRRDAEAITMAVRSLRKEARTWFNSHGSAEDSREDDVDAKASAWYYVTYHPSYWGRYNEGLNRHHFLSFAWCVYDKLVTIKKYKASIRRSLQLSSLEHGFRSGLHLY 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1938 1210 PANTHER RNA-DEPENDENT RNA POLYMERASE 85 1191 IPR007855 GO:0003968
Alju12g1938 1210 Pfam RNA dependent RNA polymerase 454 1026 IPR007855 GO:0003968
Alju12g1938 1210 SUPERFAMILY RNA-binding domain, RBD 84 155 IPR035979 GO:0003676
Alju12g1938 1210 CDD RRM_SF 87 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1938 Alju-ChrAlju12 40400244 40406127 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1938 12 40400244 40406127 Alju12g1938 12 40400244 40406127 ECH