Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1885 ATGGGTACTCTTCAGACTTGGAGAAAAGCTTATGGTGCCCTCAAAGATACTACCAAAGTTGGTCTTGCCCATGTCAACAGCGATTACGCGGATTTGGAGGTTGCCATAGTCAAAGCCACGAACCACGTTGAATGCCCTCCCAAGGAGAGACACCTTAGAAAAATTCTATTTGCCACGTCTGCTATTAGACCCCGAGCTGATGTTGCTTACTGCATTCATGCACTTGCCCGTCGATTGTCCAAGACACGAAATTGGACGGTGGCACTAAAAACACTGATAGTCATCCATAGGCTATTAAGAGAGGGTGATCCTACTTTTAAAGAAGAATTTCTTAATTTCTCACAAAGAGGACGCATTCTTCAACTTTCTAATTTTAAGGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCTTGGGTACGCACTTATGCATTGTTTTTGGAAGAGAGGCTTGAATGTTTTCGGATTTTGAAGTATGATATTGAAGCTGAACGTCTTCCCAAGCCTGCCCAAGGGCAAGAGAAGGGTTACAGCAGGACAAGAGATCTGGAAAGTGAAGAACTATTGGACCAGTTGCCTGCTTTGCAGCAGCTTCTCTATCGACTTATTGGTTGCAAGCCAGAAGGAGCAGCTTTTAGCAATTATGTGATACAATATGCTCTAGCTCTGGTACTGAAAGAGAGCTTTAAGATTTATTGTGCTGTTAATGATGGAATCATCAATCTTGTTGATAAGTTTTTTGAGATGCCGAGACATGAAGCTATCAAAGCCCTTGATATCTACAGACGTGCTGGCCAGCAGGCAGCAAATTTATCTGACTTCTATGAAGTATGCAAAGGTTTAGAACTTGCTCGGAATTTTCAGTTTCCTGTCCTAAGAGAGCCTCCTCAATCTTTTCTTACAACCATGGAAGAGTACATAAGAGAGGCACCACGAGTGGTGACTGTGCCAACTGAGCCATTGCTTCAGTTGACATACAGACCAGAGGAAGAAGTTCCTGCAATTGAAGACAGTAAAGTATCTGTTGAAGAGGAGGAGCCGTCAGTGCCTGCAGATGATGTTGTCTCCAATTCTGAGACCGTTCCCCCTCCTCCACTTCCATCTCAAAACAATTTTGACACTGGAGACTTACTGGGTTTGAATGACACTGTACCTGATGCGTCATCAATAGAGGAAAGAAATGCTCTTGCCCTAGCCATAGTACCCACAGAAAATGGCACAACATCTGGTTTTGAATCTAGTACCACTCAAGCAAAAGATTTTGATCCAACTGGATGGGAGCTTGCTTTGGTTTCCACTCCGAGTAGCAATATTTCTTCAGTCAATGAAAGACAATTGGCTGGTGGAATGGACTCACTCATTCTTAACAGCTTATACGATGAAGCAGCATATAGATCACAGCAGCCAGTGTATGGTGCACCGGCGCCAAATCCATTTGAGGTTCAAGATCCATTTTCTTTCTCAAGCAGTATCCCTCCTTCTACTGCTGTGCACATGGCAGCGATGTCTCAGCAGCAAACGAATCCATTTGGTCCATTCCAACCTTTTCAACCTCAGCCACAGACGCAGCAGCAGCAGCATCTGTTGATGAGCGCCGCAAATCCTTTTGGGGATGCCGGATTTGGGGCATTTCCTGTGAATCCTGTTTCTCATCCACAAAACAACAATCCATTTGGTAACCCTGGCTTGCTATGA 1695 0.4437 MGTLQTWRKAYGALKDTTKVGLAHVNSDYADLEVAIVKATNHVECPPKERHLRKILFATSAIRPRADVAYCIHALARRLSKTRNWTVALKTLIVIHRLLREGDPTFKEEFLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKPAQGQEKGYSRTRDLESEELLDQLPALQQLLYRLIGCKPEGAAFSNYVIQYALALVLKESFKIYCAVNDGIINLVDKFFEMPRHEAIKALDIYRRAGQQAANLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVVTVPTEPLLQLTYRPEEEVPAIEDSKVSVEEEEPSVPADDVVSNSETVPPPPLPSQNNFDTGDLLGLNDTVPDASSIEERNALALAIVPTENGTTSGFESSTTQAKDFDPTGWELALVSTPSSNISSVNERQLAGGMDSLILNSLYDEAAYRSQQPVYGAPAPNPFEVQDPFSFSSSIPPSTAVHMAAMSQQQTNPFGPFQPFQPQPQTQQQQHLLMSAANPFGDAGFGAFPVNPVSHPQNNNPFGNPGLL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1885 564 FunFam Clathrin assembly protein AP180 6 161 - -
Alju12g1885 564 FunFam Putative clathrin assembly protein 173 321 - -
Alju12g1885 564 SUPERFAMILY GAT-like domain 178 309 - -
Alju12g1885 564 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Alju12g1885 564 Gene3D - 7 161 IPR008942 -
Alju12g1885 564 CDD ANTH_N 32 154 - -
Alju12g1885 564 SMART enth_2 30 161 IPR013809 -
Alju12g1885 564 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Alju12g1885 564 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Alju12g1885 564 Gene3D ANTH domain 173 324 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Alju12g1885 564 MobiDBLite consensus disorder prediction 333 373 - -
Alju12g1885 564 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 505 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1885 Alju-ChrAlju12 39922986 39927683 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1885 12 39922986 39927683 Alju12g1885 12 39922986 39927683 ECH