Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1448 ATGGTGATTGTAGCATCACTGCCAGGACGCAACCTCTTCTCGTCCTTACCTTCGACGCCACCACCCTCCGACCCCGCCGTCAACACCTCCACTCCATCCCCTCCGATCCCAATTCCCAAATACCCACCTCCTCGCAGATCCCTCAAGTCCCAAAAACCTCATCCTGAACCCCCAAAACCCACTTCGAATCCTGGCCTGAAGCACCATCGAAATTCCAAGTACTACAAACCCGTTAAAGATGGCGTTATTAAATCGGACGGAGATCGCTCCATCGTCATTGGCGAGTCCGGAGTGTCCTACCTTCTTCCCGGAGCTCCGTTCGAATTCCAGTTCAGTTATTCCGAGACGCCGAAGGTAAAGCCGCTGGCGATACGGGAGCCGGCGTTCTTGCCGTTCGCGCCGCCCACAATGCCGAGGCCTTGGACTGGTAAAGCGCCATTGAAGAGCTCGAAGAAGAAAATCCCACTCTTCGATTCTTTCAATCCTCCCCCGCCGGGAACGAAAGGAGTGAAGCATGTTGAAATGCCAGGGCCGTTTCCTGCTGGGAAGTACCCACAGGAGGGGAAGACGAGGGAGGAGATACTTGGGGAGCCTTTGAAGAGGTGGGAAATGAGAATGCTTGTTAAACCCATGTTGAGGGAAAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTAATACATTCACATTGGAAGCGATCCCGTGTTTGTAAAGTTCGTTGCAAAGGTGTCCCAACAGTAGATATGGATAACGTCTGCTATCATCTTGAGGAGAAAACTGGGGGTAAAATAATCCATCGAGTTGGTGGTGTGGTTTATCTTTTCCGTGGGAGAAATTATAACTATCGTACTCGTCCACAGTATCCATTGATGCTCTGGAAGCCAGCTGCTCCAGTTTACCCAAAACTTATCCAAGAAGCTCCGGAAGGCTTAACAAAATCTGAAGCTGACGAATTCCGTAAGAAAGGAAAAAAGCTATTGCCAATATGTAAATTACCAAAAAATGGAGTCTATGTTTCCCTTGTGAAAGAAGCAAGACATGCTTTTGAAGGAAGTCCTTTGGTGAAAATTGACTGCAAGGGGTTGGAACCCAGTGATTACAAGAAAATAGGAGCCAAGCTTAAGGAATTGGTTCCTTGTGTGCTGTTGTCCTTTGATGATGAAGAGATACTAATGTGGAGAGGGAAAGATTGGAAATCAATGTATCCTCAACCTCCTCCAGTTGTAAGCTTTCCTGAAGTTGGTATTGCAAGGAACTTGGACAATTCAGGTAAGACTGAGGATGATCAAAATAAGCATGACAGAAACATAATGCCATCGAGCCCCAAAATGACATCCCTGTGGAAGCGTGCAATAGAGTTGAGCAAAGCGCTGTTGTTGGATGAAATTATTGTCGATCCTGATGCTCTCTTGGAGAAGGTAGAGGAATTTGAGGTTGCTTCACAGGCCACTGAACACTCCTCTCCGGCACTCATATTTTCCGGTGAAGATGGTGATGCTTCTGCTGCTAAAGGCTCACTTGCAGACTTTGAAGAAGACAACACTTATCCTAGTGATGGCTTGGCTACTGAGGACGACGACGACGACGACGACGACGAAGATTATCTGTATGTCAACGGTGATGAATATGATGATGAGGATGAATTGAACGCTGTGGCGGGTTCATCAGCCCCACCTGGATCATTACCTATTGATAGAATTGCTGACAAGCTCAGAATAAGACAAGACAAATAA 1752 0.4715 MVIVASLPGRNLFSSLPSTPPPSDPAVNTSTPSPPIPIPKYPPPRRSLKSQKPHPEPPKPTSNPGLKHHRNSKYYKPVKDGVIKSDGDRSIVIGESGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKHVEMPGPFPAGKYPQEGKTREEILGEPLKRWEMRMLVKPMLRENRQVNLGRDGLTHNMLELIHSHWKRSRVCKVRCKGVPTVDMDNVCYHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKSEADEFRKKGKKLLPICKLPKNGVYVSLVKEARHAFEGSPLVKIDCKGLEPSDYKKIGAKLKELVPCVLLSFDDEEILMWRGKDWKSMYPQPPPVVSFPEVGIARNLDNSGKTEDDQNKHDRNIMPSSPKMTSLWKRAIELSKALLLDEIIVDPDALLEKVEEFEVASQATEHSSPALIFSGEDGDASAAKGSLADFEEDNTYPSDGLATEDDDDDDDDEDYLYVNGDEYDDEDELNAVAGSSAPPGSLPIDRIADKLRIRQDK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1448 583 MobiDBLite consensus disorder prediction 18 62 - -
Alju12g1448 583 SMART CRS1_YhbY_2 199 282 IPR001890 GO:0003723
Alju12g1448 583 SMART CRS1_YhbY_2 317 400 IPR001890 GO:0003723
Alju12g1448 583 MobiDBLite consensus disorder prediction 487 574 - -
Alju12g1448 583 MobiDBLite consensus disorder prediction 524 555 - -
Alju12g1448 583 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 50 576 IPR044599 GO:0000373
Alju12g1448 583 SUPERFAMILY YhbY-like 198 292 IPR035920 -
Alju12g1448 583 MobiDBLite consensus disorder prediction 428 442 - -
Alju12g1448 583 ProSiteProfiles CRM domain profile. 197 293 IPR001890 GO:0003723
Alju12g1448 583 ProSiteProfiles CRM domain profile. 315 411 IPR001890 GO:0003723
Alju12g1448 583 FunFam CRS2-associated factor 1, chloroplastic 316 410 - -
Alju12g1448 583 MobiDBLite consensus disorder prediction 425 446 - -
Alju12g1448 583 SUPERFAMILY YhbY-like 317 408 IPR035920 -
Alju12g1448 583 Gene3D - 317 411 IPR035920 -
Alju12g1448 583 Gene3D - 198 294 IPR035920 -
Alju12g1448 583 FunFam CRS2-associated factor 1, chloroplastic 198 293 - -
Alju12g1448 583 Pfam CRS1 / YhbY (CRM) domain 202 282 IPR001890 GO:0003723
Alju12g1448 583 Pfam CRS1 / YhbY (CRM) domain 317 400 IPR001890 GO:0003723
Alju12g1448 583 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1448 Alju-ChrAlju12 35644766 35648325 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1448 12 35644766 35648325 Alju12g1448 12 35644766 35648325 ECH