Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1412 ATGGCATTTTTGCGGCAAAAGTTTCTATTCTCAGCTCTAATCTCAATCCTCTGCTTTTCCTTTGAGGTTTCTTCAAATAGAAGGGTTTATACGCCTCCAAATGTCACACCTTTGACTAGTTCTTTTCCTCGTGTTCCAATTGATCGTGGGTTTTCTAAGTCCTTTGGGGCCTCAAATATTCAGTATCTCAATAATGGGTCCATGGCCACTCTGGCTCTTGACAAAAATTCAGGCTCTGGTTTGGTCTCACAAGGCAGATACTACTATGGATTCTTCAGTGCAGCCATCAAACTACCTGCTGGTCTTTCATCTGGTGTTGTAGTAGCCTTCTATTTGTCAAATGCAGATAAGTTCCCTCACAACCATGATGAGATTGATATTGAGCTTCTGGGACATGACAAGAGAAACGATTGGGTTATTCAAACCAATTTGTATGCAAATGGAAGTGTAAGCACTGGAAGAGAAGAGAAGTTCTATCTCTGGTTTGACCCCACAAAGGAGCACCATTACTACAGTATCTTATGGAACAGCTATCACACAGTGTTTTTAGTGGACAATATTCCAGTGAGAGAGTTCATCCACAGCGATTCATATCCTTCTATATACCCATCAAAGCCAATGTCTGTGTATGCAACAATATGGGACGCATCAGATTGGGCAACACATGGAGGAAAATACCCAGTGAATTATAAGTATGCTCCATTTGTTGCTTCTTTCACTGAAATGGAATTAAGTGGTTGTGTGGTTTCAAATCCTTCAGAAACATCATCATCATCAGCTTCTTCTTCTTCATCTTCTTCTACTACTACATGCTCAAAATCTTCTTCAAGTACTTCAGGCTTGGACCCTGCAAATGGACCTGAGTTCTCTAAGCTGTCTCAACAGCAGATTGCAGCCATGGATTGGGCAAGAAGGAAACTCATGTTTTACTCTTATTGTAATGATAAACCCAGATACAAAGTCATGCCTCCAGAATGCCACTGA 984 0.4096 MAFLRQKFLFSALISILCFSFEVSSNRRVYTPPNVTPLTSSFPRVPIDRGFSKSFGASNIQYLNNGSMATLALDKNSGSGLVSQGRYYYGFFSAAIKLPAGLSSGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNLYANGSVSTGREEKFYLWFDPTKEHHYYSILWNSYHTVFLVDNIPVREFIHSDSYPSIYPSKPMSVYATIWDASDWATHGGKYPVNYKYAPFVASFTEMELSGCVVSNPSETSSSSASSSSSSSTTTCSKSSSSTSGLDPANGPEFSKLSQQQIAAMDWARRKLMFYSYCNDKPRYKVMPPECH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1412 327 MobiDBLite consensus disorder prediction 255 288 - -
Alju12g1412 327 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 38 239 IPR000757 GO:0004553|GO:0005975
Alju12g1412 327 PIRSF EndGlu_transf 11 327 IPR016455 GO:0010411|GO:0016762|GO:0042546
Alju12g1412 327 Pfam Glycosyl hydrolases family 16 51 231 IPR000757 GO:0004553|GO:0005975
Alju12g1412 327 Gene3D - 30 326 - -
Alju12g1412 327 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 326 IPR013320 -
Alju12g1412 327 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 290 326 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Alju12g1412 327 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 47 326 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1412 Alju-ChrAlju12 35371011 35372411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1412 11 327 Glycoside Hydrolase AT1G10550 62.461 2.46e-148 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1412 12 35371011 35372411 Alju12g1412 12 35371011 35372411 ECH