Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1348 ATGGCTCTCTCTCGCTTCGCTTCTTCTTTTTCTTCGTCTAGATCCAATCTTATCAGACCCATCTCTTCTGCATTCTCCTCCGCCCCTTCTCTCCGCCGCCCGCTCTCCTCTTCCGCCGATGACTCCTCCATCCTTACCATTGAGACCTCTCTTCCATTCAGCGCCCACAATTGCGACACCCCTTCGCGCTCCGTCGACACCACTCCCAAGGAACTCATGTCCTTCTTCCGCGACATGGCCGTCATGCGACGGATGGAGATTGCCGCGGATTCCCTCTATAAGTCTAAGCTCGTCCGAGGGTTCTGTCACTTGTACGATGGTCAGGAAGCTGTGGCCATCGGCATGGAGGCTGCCACTACCAGGAAGGATTGCATAATAACATCTTACCGTGACCATTGTACCTTCCTGGCCCGCGGTGGAACCCTGTTGGAAGTGTTTGCGGAGCTCATGGGTCGTAAAGATGGATGCGCGAATGGAAAGGGTGGCTCTATGCACTTCTATAGGAAGGAAGCTGGGTTCTATGGCGGTCACGGGATCGTTGGGGCTCAGATACCGCTTGGATGTGGATTAGCTTTTGCTCAGAAGTACTCTAAGAATGAAAATGTCACGTTTGCTATGTACGGTGATGGTGCGGCAAATCAGGGCCAGTTGTTCGAGGCGCTAAACATAGCCGCGCTTTGGGATCTCCCTGCAATTTTGGTCTGCGAGAATAATCATTACGGGATGGGGACGGCAGAATGGAGAGCTGCTAAGAGTGCTGCTTATTACAAGCGTGGGGACTATGTTGCTGGGTTGAAGGTAGATGGCATGGATGTTCTTGCTGTAAAACAAGCATGTGCATTTGCAAAGGAGTATGCTTTGAAGAATGGGCCCATTGTTCTTGAATTGGACACGTACAGGTACCATGGGCATTCCATGTCAGATCCTGGTAGCACATATCGTACACGTGATGAGGTTTCTGGCGTGAGACAGGAGCGTGATCCAATTGAGAGAGTGAGGAAGCTGTTATTGAAACACGAGATTGCCGCTGAAAAGGAACTAAAGGACATTGAAAAGGAAGTCAAAAAAGAAGTTGATGAAGCTATAGCTAAAGCAAAGGAGAGTTCATTGCTGGAGCCATCTGAATTATTTACCAATATATACGTTAATGGTTTAGGGACTGAGTCATTTGGGGCTGACAGAAAGGAAGTAAGAGTTACTTTACCATGA 1209 0.493 MALSRFASSFSSSRSNLIRPISSAFSSAPSLRRPLSSSADDSSILTIETSLPFSAHNCDTPSRSVDTTPKELMSFFRDMAVMRRMEIAADSLYKSKLVRGFCHLYDGQEAVAIGMEAATTRKDCIITSYRDHCTFLARGGTLLEVFAELMGRKDGCANGKGGSMHFYRKEAGFYGGHGIVGAQIPLGCGLAFAQKYSKNENVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSAAYYKRGDYVAGLKVDGMDVLAVKQACAFAKEYALKNGPIVLELDTYRYHGHSMSDPGSTYRTRDEVSGVRQERDPIERVRKLLLKHEIAAEKELKDIEKEVKKEVDEAIAKAKESSLLEPSELFTNIYVNGLGTESFGADRKEVRVTLP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1348 402 Pfam Dehydrogenase E1 component 78 373 IPR001017 GO:0016624
Alju12g1348 402 Gene3D - 34 396 - -
Alju12g1348 402 FunFam Pyruvate dehydrogenase E1 component subunit alpha 35 395 - -
Alju12g1348 402 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 56 383 IPR029061 -
Alju12g1348 402 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 39 384 - -
Alju12g1348 402 Coils Coil 340 364 - -
Alju12g1348 402 CDD TPP_E1_PDC_ADC_BCADC 75 365 - -
Alju12g1348 402 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 70 382 IPR017597 GO:0004739|GO:0006086|GO:0043231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1348 Alju-ChrAlju12 34660756 34664692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1348 1 402 Acyl Lipid Metabolism Gene Families AT1G24180 75.434 0.0 646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1348 12 34660756 34664692 Alju12g1348 12 34660756 34664692 ECH