Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1096 ATGCCACCATGTGAGGACAAGTGGGAGATGAGGGAATTGGGGACTGACTCACAGACTAAAATCCCTAAAATCCCCCCTTACTATTCTCTGTATCCTTTTACTCCCTTCTCCAGTCCGACAGCAGGACTTCGCAGCGGCCAGACGCCGACGTTCACGCAAGAGTCTAAACAGCGTTGTCTTCTTCATTTCCTTTTAACTCTCAAATATTTCACTCAAGCTGTGCTGCTGTTTGGTGTGATGCCTTCCATGGCTCATGGAGGATTCAGAAACTTCACCGGCGGTCAGAAGCCTGGTAGTAAATTATCGAATGAAAATCAGAATCGTCAAACTGATTTCCCTACCCGGCGACAGAAGATTTTACAGCAAAGAAAGTCTCTTCCAATTGCTTCAGTTGAGAAAAGACTTGTTGAAGAGGTCCGAAAGCATGATATTTTGATAATCGTTGGTGAGACTGGAAGTGGAAAGACCACACAGATCCCCCAATTCCTGTTTGATACTGGATTTTGTCATGATGGAAAAGTTATTGGTATAACTCAACCTCGGCGTGTTGCTGCTGTTACTGTGGCAAGACGGGTTTCTGAGGAATGTGGTGTTGAATTGGGCCAAAAGGTCGGTTACTCTATTAGATTTGATGATGCTACCTCAAGTTCAACAAGGATTAAATACATGACAGATGGATTGCTTCTGAGGGAAGCATTATTGGATCCATTTCTTTCTAAGTATTCTGTTATAATTGTTGATGAAGCTCATGAGAGAACTGTCCACACTGATGTCTTGATGGGCTTGCTTAAAAATGTACAACATGCTCGTTCCAATACTGTTTCTGATGGTCAGAGACCTAATTCTGAAAACAAGAATGTAAAGAGTGGCATGTCATTGGAGAAAGAAAATGGTGGTCAGTGTGGCAGTTTTCTTAGGAAGCACAATAACAGAAAGTATGCTCCCCTGAAGCTAATCATCATGTCTGCAAGTCTTGATGCTCAGGTGTTTTCTGAGTACTTTGGTGGTGCAAAAGCTGTTCATGTCCAAGGGAGACAATTTCCTGTCGATATGTTTTATACTCGTCATTCAGAGGCAGATTATTTAGATGCTTCTTTGATAACAATATTCCAGATTCATTTGGGGGAGGGCCCTGGTGATATACTAGTATTTCTGACTGGCCAAGAAGAGATCGAATCCATTGAAAGGCTAATAAATGAGCGACTCAAGCAATTACCTGAAAGCAGCCAGAAGCTACTAACTGTGTCTATATTTGCAGCTCTTCCTTCTGAGCAGCAAATGCGAGTATTTTCACCAGCTCCATCTGGATTTCGCAAGGTAATATTGGCAACTAATATTGCTGAAACATCAGTAACAATCCCTGGAATCAAGTATGTAGTGGATCCTGGATTTGTGAAAGCACGCACTTATGACCCTAGCAAAGGAATGGAATCTTTGGTTGTTGTACCTACATCCAAGTCTCAGGCTCTGCAAAGGAGTGGGCGTGCAGGGCGTGAAGGACCAGGAAAATGTTTTCGTCTCTATCCAGAAAGTGAATTTGAGAAGCTTGAGGACTCTACAAAGCCAGAGATTAAGCGATGCAACCTCTCCAATGTCATTTTGCAGCTTAAGGCTTTAGGTGTTGATGACATACTAGGGTTTGATTTCATTGAGAAACCTTCAAGGGAAGCTATCATCAAATCATTGGAGCAGCTAATCTTGTTGGGTGCTCTAACAGATAACGGTCAACTATCTGATCCAGTTGGAATTCAAATGGCTCAGCTTCCCTTGGACCCTATTTATTCCAAAGCTCTTATTTTAGCTAGTCAGTTTAACTGCTTGGAGGAGATGTTGATAACTGTTGCCATGCTTTCTGTGGAATCCGTATTTTATGCTCCTCGTGACAAGTTAGAAGAGGCAAGAACTGCAATGAAATGCTTCTCAAGTCCAGAAGGGGACCACCTGACTTTGATTAATGTGTATCGAGCAGCTAATGAGTTCCTAGAAAAGAGATCGGTGGGAATGGGTAATGCAAAAGGTGAAAAGGCTCTGAGGAAGTGGTGCAAGGAAAACTTTATCAATAGCCGTTCTCTCAAGCATGCTCGTGACATTCACAAGCAAATTTCCGGGAACGTTGAACAAATGGGCTTGCAAATTGCTTCTTGCGGAGATGATATGCTTCCGTACCGCAGATGCCTTGCTGCTTCCTTTTTCCTGAATGCAGCTGTAAAGCAGCCAGAGGGAACATACAGGGCTCTCGCAAGTGGTCAGGTGGTGCAGATCCACCCTTCTTCAGTACTGTTTCAACAAAAACCAGAGTGCATAATATTTAATGAACTGGTCCAAACTAATAACAAGTATATACGGAATATAACTAGAATTGACTACCTATGGTTGACTGAGCTGGCTCCACAATATTATGCTGTGCAGAATTAA 2415 0.4269 MPPCEDKWEMRELGTDSQTKIPKIPPYYSLYPFTPFSSPTAGLRSGQTPTFTQESKQRCLLHFLLTLKYFTQAVLLFGVMPSMAHGGFRNFTGGQKPGSKLSNENQNRQTDFPTRRQKILQQRKSLPIASVEKRLVEEVRKHDILIIVGETGSGKTTQIPQFLFDTGFCHDGKVIGITQPRRVAAVTVARRVSEECGVELGQKVGYSIRFDDATSSSTRIKYMTDGLLLREALLDPFLSKYSVIIVDEAHERTVHTDVLMGLLKNVQHARSNTVSDGQRPNSENKNVKSGMSLEKENGGQCGSFLRKHNNRKYAPLKLIIMSASLDAQVFSEYFGGAKAVHVQGRQFPVDMFYTRHSEADYLDASLITIFQIHLGEGPGDILVFLTGQEEIESIERLINERLKQLPESSQKLLTVSIFAALPSEQQMRVFSPAPSGFRKVILATNIAETSVTIPGIKYVVDPGFVKARTYDPSKGMESLVVVPTSKSQALQRSGRAGREGPGKCFRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSREAIIKSLEQLILLGALTDNGQLSDPVGIQMAQLPLDPIYSKALILASQFNCLEEMLITVAMLSVESVFYAPRDKLEEARTAMKCFSSPEGDHLTLINVYRAANEFLEKRSVGMGNAKGEKALRKWCKENFINSRSLKHARDIHKQISGNVEQMGLQIASCGDDMLPYRRCLAASFFLNAAVKQPEGTYRALASGQVVQIHPSSVLFQQKPECIIFNELVQTNNKYIRNITRIDYLWLTELAPQYYAVQN 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1096 804 Gene3D - 547 716 - -
Alju12g1096 804 MobiDBLite consensus disorder prediction 90 114 - -
Alju12g1096 804 CDD DEXHc_DHX33 126 342 - -
Alju12g1096 804 MobiDBLite consensus disorder prediction 271 293 - -
Alju12g1096 804 Gene3D - 89 345 IPR027417 -
Alju12g1096 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 755 IPR027417 -
Alju12g1096 804 SMART helicmild6 392 500 IPR001650 -
Alju12g1096 804 CDD SF2_C_RHA 347 508 - -
Alju12g1096 804 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 361 540 IPR001650 -
Alju12g1096 804 PANTHER ATP-DEPENDENT RNA HELICASE 113 792 - -
Alju12g1096 804 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 136 343 IPR014001 -
Alju12g1096 804 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 723 799 IPR011709 -
Alju12g1096 804 SMART ha2_5 560 651 IPR007502 GO:0004386
Alju12g1096 804 Gene3D - 346 519 IPR027417 -
Alju12g1096 804 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 242 251 IPR002464 -
Alju12g1096 804 MobiDBLite consensus disorder prediction 95 114 - -
Alju12g1096 804 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 346 520 - -
Alju12g1096 804 Pfam Helicase associated domain (HA2) 561 685 IPR007502 GO:0004386
Alju12g1096 804 SMART ultradead3 124 352 IPR014001 -
Alju12g1096 804 Pfam Helicase conserved C-terminal domain 373 499 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1096 Alju-ChrAlju12 31548262 31557813 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1096 12 31548262 31557813 Alju12g1096 12 31548262 31557813 ECH