Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1006 ATGAAAAGCCATGGGATTTGGGTTATCTTTATTTGCTTTCTTCTGGGTGCAACTTGTTTTGGACAAGAAGAGCTTGAAGTGGCTCCAATGGAGAAGAGAGAGCTTGAAGCTCTATACTCTACCATACAAGGCTTTGTTGGAAATTGGTGGAATGGCTCAGATCTCTATCCGGATCCTTGTGGGTGGACTCCAATTCAGGGTGTCTCCTGTGATCTATTTAATGGGCTTTGGTATGTTACTTCCTTGAACATAGGACCCATACATGAAAATTCTATATCTTGTTCCCAGAAGTCGGAATTTAGGCCTCACTTGTCTGAGTTCAAGCACCTACAATCTCTGTCCTTCTTCAACTGCTTTGTATCAAGAGACAAGAATCCAGTTACTATCCCAACTGGGAACTGGGAGAAACTTTCTGGAAGCCTAGAATCACTTGAGTTTCGGTCGAATCCAGGTCTCATTGGAAAAATCCCAAAAAGTTTTGGTCTCCTCAACAACCTCAAATCTCTGGTATTACTAGGAAATGGTTTAACAGGGGAAATACCACCAGACATAGGCAATCTTACGAAGCTGAAAAGACTTGTTCTTGCAGAGAACTCTTGTAGTGGGCAGATTCCAGAGATTTTCAGCAAATTAAGTGAATTACTGATTTTGGATTTAAGTAGAAATTCACTTTCTGGGTCTTTGCCTTTATCTCTTGGAAGCTTAACTTCATTATTGAAGCTTGATGTAAGCAACAATAATCTAGAAGGAAATCTGCTAAATGGGTTTGGTAATCTCAAGAATCTGACCCTAATGGACCTAAGAAACAACAGATTCCAAGGTGGGTTGGTGTTGTCTATTCAAGAGATGTATTCCTTAGAAGAATTGGCCTTATCCAACAATCCAATTGGTGGAAGCTTCAGTGTCCTAAAGTGGCAAAATCTTCAGAACTTGGTAATTCTTGAACTCTCTAACATGGGATTGACAGGGGAAATACCAGAGTCCATAACAGAGTTAAGGAGATTGAGGTTTTTGGGTCTACGTGACAACCACCTTACAGGCAACCTTAATCCTAAGCTAGAAACTCTTCCTTGTCTCAATGCACTGTACCTAAGTGGAAACAATCTGACGGGAGACCTTAAATTCTCCGAGCAGTTTTATGGCAAAATGGGTAGCCGTTTTGGGGCCTGGGATAACCCTAACCTTTGTTACCCTGTTCGAGAAATATCAACAAATCAAGTTCCATTTGGGGTAAGACCTTGCCATCAAGAGGTCTAG 1257 0.4121 MKSHGIWVIFICFLLGATCFGQEELEVAPMEKRELEALYSTIQGFVGNWWNGSDLYPDPCGWTPIQGVSCDLFNGLWYVTSLNIGPIHENSISCSQKSEFRPHLSEFKHLQSLSFFNCFVSRDKNPVTIPTGNWEKLSGSLESLEFRSNPGLIGKIPKSFGLLNNLKSLVLLGNGLTGEIPPDIGNLTKLKRLVLAENSCSGQIPEIFSKLSELLILDLSRNSLSGSLPLSLGSLTSLLKLDVSNNNLEGNLLNGFGNLKNLTLMDLRNNRFQGGLVLSIQEMYSLEELALSNNPIGGSFSVLKWQNLQNLVILELSNMGLTGEIPESITELRRLRFLGLRDNHLTGNLNPKLETLPCLNALYLSGNNLTGDLKFSEQFYGKMGSRFGAWDNPNLCYPVREISTNQVPFGVRPCHQEV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1006 418 Gene3D Ribonuclease Inhibitor 32 202 IPR032675 -
Alju12g1006 418 FunFam Piriformospora indica-insensitive protein 2 205 301 - -
Alju12g1006 418 Gene3D Ribonuclease Inhibitor 303 403 IPR032675 -
Alju12g1006 418 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 27 276 - -
Alju12g1006 418 SUPERFAMILY L domain-like 37 374 - -
Alju12g1006 418 FunFam Piriformospora indica-insensitive protein 2 33 204 - -
Alju12g1006 418 Gene3D Ribonuclease Inhibitor 203 302 IPR032675 -
Alju12g1006 418 PRINTS Leucine-rich repeat signature 214 227 - -
Alju12g1006 418 PRINTS Leucine-rich repeat signature 235 248 - -
Alju12g1006 418 FunFam Piriformospora indica-insensitive protein 2 302 404 - -
Alju12g1006 418 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1006 Alju-ChrAlju12 30191230 30193059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1006 140 414 Receptor kinase-like Gene Family AT4G08850 29.455 4.27e-22 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1006 12 30191230 30193059 Alju12g1006 12 30191230 30193059 ECH