LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju12g0979	ATGGAGTCTCCCGCCTATTCATCATCCTCTTCCGATTCCGGTACTATCGCCGCCAGTGATCAGAATGCGGAGCGAAGTCGGAGAAGTGGCGACGCCCATGACGCTGCGACCTTTGAGCAATCGCGTCGGTGGCATGATGTTTTCTGGTCGGGAATATTTATTATTCATTTGATTTTTCTGGCATTCATTATGGCGGTTCTCGGCCTCGATACGTTCAAGCAAAGAGATAGACTAAAACTTGGTATGTACACCGGACCGCTTCGCACGCATGAACATGGATTGACCGAGGATTACTGGCCACTTTATGCTGTTGCTGGTGGAGTTGGGACTGTTCTCGGATTGAGTTGGCTGCTTCTGTTGGGTTTTCGCGCGAATCAAATGATGAAGGTGTCTGTACACATACTGACCACTTATCTTGCTGTGATCAGTGTTTTGTGTTTCTGGGCTATACAAATTTTCTGGGGAATGTTTTTTGCCATTGGAGCAGCCCTGCAATTCTTGTACTTGATATCGGTCATTGACAGACTTCCGTTTACCATGCTGGTTCTGCAAAAAGCTATGAAGATGGTTCGCAGTCTTCCTGAGGTTTTGAGAGTGGCATATGCATTTATGCTTGTGGTTCTATTATGGATGGCCTTATGGTCTTTTGGTGCATCAGGCGTTGTGGCTTCGAGCTTCTTCGATGTTGGATGCTGGTGGGTTCTTTTGATTTTTAGTGTCAGCCTATTCTGGACAGGCGCTGTACTCTGTAATACTGTACATGTAATAGTGTCTGGCATGGTGTTTCTCAATCTAATCCATGGTGGTAGAGATGCAACTTCAACACCTGCTAACTCCTTGATAAGATCTTTACGATATGCCTTGACGAAATCCTTTGGCAGCATTTGTTATGGCTCATTATTTACTGCTGCTATCAGGACACTTAGGTGGGAGATAAGGGGTGTCCGGTCGAAGATCGGCAACAACGAGTGTTTGCTTTGCTGTGTTGATTTCCTTTTCCATCTTGTGGAGACTCTTGTCCGATTCTTTAACAAGTATGGCTATGTTCAGATAGCTGTTAATGGTAAAAGCTTTAACCGTTCAGCTAGAGATGCCTGGGAGTTACTCCAGTCAACTGGTGTTGAAGCACTTGTAGCATATGACTGTTCGGGTGCGGTCCTGCTAATGGGTGCCATCTGTGGCGGTTTGATAACCGGAACATGCTCTGGTGTATGGGCGTGCTTCAGATTTACCGACATAGACAGAGTATTTATGATTGGAACCACATCTATGTTGATGGGGATGGTCTTGGTTGGGGTGGCTATGGTTGTGGTGGAAAGTGCAGTGACATGCATATATATCTGCTATGCGGAGGACCCGTTGTTGATTCGGAGATGGGACGCTGAATTTTTCAATCAGATGTCTGAGACACTGCACCAGAGACTTCAACATAGGAGTGCTCGAACAAGGGAAGTTGTAACCAACTCACAACTTGAGTGCCGTGTTCGACAAAGCACTTCTTTTTAA	1506	0.4588	MESPAYSSSSSDSGTIAASDQNAERSRRSGDAHDAATFEQSRRWHDVFWSGIFIIHLIFLAFIMAVLGLDTFKQRDRLKLGMYTGPLRTHEHGLTEDYWPLYAVAGGVGTVLGLSWLLLLGFRANQMMKVSVHILTTYLAVISVLCFWAIQIFWGMFFAIGAALQFLYLISVIDRLPFTMLVLQKAMKMVRSLPEVLRVAYAFMLVVLLWMALWSFGASGVVASSFFDVGCWWVLLIFSVSLFWTGAVLCNTVHVIVSGMVFLNLIHGGRDATSTPANSLIRSLRYALTKSFGSICYGSLFTAAIRTLRWEIRGVRSKIGNNECLLCCVDFLFHLVETLVRFFNKYGYVQIAVNGKSFNRSARDAWELLQSTGVEALVAYDCSGAVLLMGAICGGLITGTCSGVWACFRFTDIDRVFMIGTTSMLMGMVLVGVAMVVVESAVTCIYICYAEDPLLIRRWDAEFFNQMSETLHQRLQHRSARTREVVTNSQLECRVRQSTSF	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju12g0979	501	Pfam	Plasma-membrane choline transporter	157	453	IPR007603	GO:0022857\|GO:0055085
	Alju12g0979	501	MobiDBLite	consensus disorder prediction	1	23	-	-
	Alju12g0979	501	PANTHER	CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)	22	482	IPR007603	GO:0022857\|GO:0055085
	Alju12g0979	501	MobiDBLite	consensus disorder prediction	1	32	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju12g0979	Alju-ChrAlju12	29616713	29621293	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju12g0979	12	29616713	29621293	Alju12g0979	12	29616713	29621293	ECH