Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0974 ATGGAAAAAGAAAAAGAAAAACTGGAACAAAAATCTCCTTCATTTCTTGCCGTCTCCCTTCTTTCTCTGACCTCAGGGTCTTCTTCCGACTTCTGTAATCATTGGGGCGTCCGGCGGGAAGTCATAGAAATTAAAGTTGGTAAGAGGCTCTGAAATCTTGGGAGCAAAATGTCTAATGTTGATGAACCACTATATCCAATAGCGGTGCTCATTGACGAGCTCAAAAATGATGACATCCAGCTACGCCTGAATTCAATTCGCAAGCTATCAACAATTGCACGTGCTCTTGGGGAGGATCGAACGCGTAGGGAATTAATTCCATTTCTAAGTGAGAACAATGATGATGATGATGAGGTACTTCTTGCAATGGCGGAAGAGTTGGGAGTATTCATTCCTTATGTTGGGGGAGTAGAACATGCCAATGTATTACTCCCACCTCTGGAGACACTTTGCACTGTTGAGGAAACTTGTGTGAGAGACAAAGCAGTGGAGTCTCTTTGTAGAATTGGATCTCAAATGAGGGAGAGTGATTTGGTTGATTCATTTATCCCGTTGGTGAAGAGATTGGCAGCAGGTGAATGGTTTACGGCCCGAGTCTCTGCATGTGGACTATTTCATATTGCATACTCAAGTGCACCAGAGACATCAAAGACTGAGTTGAGGTCAATATACAGCCAATTGTGTCAAGATGACATGCCTATGGTTAGAAGGTCTGCAGCATCAAACCTTGGCAAATTTGCAGCAACTGTTGAATATCCTCATCTGAAGTCAGACGTCATGCAAATTTTTGAGGATCTTACTCAGGATGATCAAGACTCTGTTAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGGAACCTCAAGATTGTGTTTCACATATACTCCCTGTTATTGTCAACTTCTCTCAGGATAAGTCTTGGCGTGTTCGTTACATGGTTGCTAACCAATTGTATGAGCTATGTGAGGCTGTAGGCCCTGATACCACCAGAACGGAGTTGGTCCCCGCATATGTTCGTTTGCTACGAGACAATGAAGCAGAAGTGCGTATTGCAGCTGCTGGAAAAGTCACCAAATTCTGCAAAATTTTAAATCCAGAACTAGCTATTCAGCATATTCTCCCTTGCGTCAAGGAATTGTCATCAGATTCTTCGCAGCATGTCCGTTCTGCTTTGGCTTCAGTAATTATGGGAATGGCTCCAGTGTTGGGAAAGGATGCTACAATTGAGCAGCTTCTTCCTATTTTTCTCTCCCTTCTAAAGGATGAATTTCCTGATGTTCGCTTGAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATTGATTTGTTATCTCAATCTTTGTTACCGGCCATTGTTGAGCTAGCCGAAGATAGGCATTGGAGAGTTCGCCTTGCGATAATAGAGTATATACCCTTATTGGCAAGTCAACTGGGTGTAGGATTTTTTGATGATAAACTAGGTGCTCTTTGCATGCAATGGTTACAGGATAAGGTTCATTCAATCCGTGAAGCAGCTGCTAACAACTTGAAGCGGCTTGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAGCATATAATTCCACAGGTTTTGGAGATGATCAGCAATCCACATTACTTGTATCGCATGACCATTCTTCAAGCTATCTCTCTGCTTGCTCCTGTAATGGGGCCTGAAATCACGTGTTTGAAATTGTTGCCTGTCGTTATCGCTTCATCGAAAGACAAAGTACCCAACATCAAGTTCAATGTTGCAAAGGTGTTAGAGTCAATCTTCCCCATCGTTGATCCATCTGTGGTGGAAAATACAATTCGTCCATGTTTGGTTGAGCTTAGTGAGGATCCTGATGTGGATGTTCGACACTTTTCGAACAAAGCGCTTCAGGCAATTGATCATGTAATGATGTCAAGTTAG 1932 0.4306 MEKEKEKLEQKSPSFLAVSLLSLTSGSSSDFCNHWGVRREVIEIKVGKRLXNLGSKMSNVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEDRTRRELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDSFIPLVKRLAAGEWFTARVSACGLFHIAYSSAPETSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYPHLKSDVMQIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVSHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDTTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCKILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQVLEMISNPHYLYRMTILQAISLLAPVMGPEITCLKLLPVVIASSKDKVPNIKFNVAKVLESIFPIVDPSVVENTIRPCLVELSEDPDVDVRHFSNKALQAIDHVMMSS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 454 492 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 337 375 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 532 567 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 415 453 IPR021133 -
Alju12g0974 643 Pfam HEAT repeat 298 326 IPR000357 GO:0005515
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 610 643 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 259 297 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 493 531 IPR021133 -
Alju12g0974 643 Pfam HEAT repeats 417 517 - -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 298 336 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 376 414 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 571 609 IPR021133 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 66 104 IPR021133 -
Alju12g0974 643 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 58 637 - -
Alju12g0974 643 Gene3D - 57 639 IPR011989 -
Alju12g0974 643 ProSiteProfiles HEAT repeat profile. 220 258 IPR021133 -
Alju12g0974 643 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 58 638 - -
Alju12g0974 643 SUPERFAMILY ARM repeat 64 636 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0974 Alju-ChrAlju12 29534684 29539590 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0974 12 29534684 29539590 Alju12g0974 12 29534684 29539590 ECH