Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0413 ATGGCTTTAACACTTCGTTCTTCAAATTCCTTCTTTTCTCAAATAGAAACCCAAGTTTCCAAACCTCGTGAAGATTACTTGCCCTCCACAGTTTTCTTTGCAAGGATCAAGTCATCACCTTCATCATTCCGTCTCAGAGCAAGCCATGTTACAGTCGCCGCCGCCGCCGGCAACAAGGTAACGGGCTTAGAAGCAAGCAAGGAGGAGCTGCATCATCGGCCATTGGTGGCTCCTCATAAGCACGATGATTCAATGAAAGTGCCAGTGTTTGTAATGCTGCCATTAGACACAGTGACGATGGGAGGGACTCTGAACAAGGCACGAGCCATGAACGCTAGTCTAATGGCCCTAAAAACTGCAGGAGTTGAAGGAGTCATGGTGGATGCTTGGTGGGGCTTAGTTGAAAAAGATGGCCCTATGAGCTATAACTGGGAACCTTACGCTGAACTTATTCACATGGTACAAAAACATGGATTAAAGCTTCAAGTCGTCATGTCCTTTCATCAATGTGGAGGAAACGTCGGCGACTCTTGCAGTATTCCTTTACCTCCTTGGGTGCTTGAAGAAATCAGCAAGAATCCTGACCTGGTTTACACAGACAGATCTGGGAGGAGAAATCCTGAGTATATTTCTTTGGGGTGTGATTTGATTCCTGTTCTAAGAGGAAGGACGCCTCTTCAGGTGTACTCTGACTTTATGACTAGTTTCCGTGACATATTCAGAGATTACTTGGGCAGTGTTATCCAAGAAATTCAAGTAGGGATGGGTCCTTGTGGAGAACTCAGATATCCATCTTATCCAGAAAGCAATGGAACTTGGAGGTTTCCAGGAATTGGTGAATTCCAGTGCTACGACAAGTATATGAGGGCATCGTTGGAAGCAGCAGCAGAGTCGATTGGGAAAAGGGATTGGGGGAGAAGTGGGCCCCACGATTCTGGCCAATACAATCAATTCCCTGAAGATACGGCATTCTTCAGGCGTGAAGGAACTTGGAACTCCGATTACGGAAGCTTCTTCCTCGCCTGGTACTCCAACAAATTGATCGAACACGGTGACCGGATCCTCGAATCCGCCGGCCGGATATTCCAATCGACCGGAGCCAAACTCTCGGCGAAAATCGCCGGCATCCATTGGCATTACAATACAAGATCGCACGCCGCCGAGCTAACCGCCGGCTACTACAACACCCGATTCCGCGACGGCTACCTTCCGATCGCACAAATGCTAGCGAAACACGGAGCGATCTTCAACTTCACGTGTATGGAGATGAAGGATTCGCAGCAACCTCATCACGCGAGTTGCTCGCCGGAGGGACTGGTTCGTCAGGTGAAGATGACGGCGAAGACGGCGAGAGTACAACTGGCAGGCGAAAACGCTTTGGAAAGATACGATTGGGATGGGTACGGACAAGTAATGGAAACGAGTAGATCAGATTGCGGGAACGGATTGGTGTCGTTCACGTATCTGAGGATGAACAAGAGGTTGTTCGAAGAGCAAAATTGGCGGCCATTTGCGGATTTTGTGAGGAGCATGTCGGAAGGTGGCCGGAGACAGAGACTTCCCGATTATGATACGCGTGGGACTGATCTGTACGTTGCCCACATCAAAGGGATTCACAAGCACAAGCAGGTTCAAGAGGAAGCTCTGGTGTGA 1653 0.49 MALTLRSSNSFFSQIETQVSKPREDYLPSTVFFARIKSSPSSFRLRASHVTVAAAAGNKVTGLEASKEELHHRPLVAPHKHDDSMKVPVFVMLPLDTVTMGGTLNKARAMNASLMALKTAGVEGVMVDAWWGLVEKDGPMSYNWEPYAELIHMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDLIPVLRGRTPLQVYSDFMTSFRDIFRDYLGSVIQEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEAAAESIGKRDWGRSGPHDSGQYNQFPEDTAFFRREGTWNSDYGSFFLAWYSNKLIEHGDRILESAGRIFQSTGAKLSAKIAGIHWHYNTRSHAAELTAGYYNTRFRDGYLPIAQMLAKHGAIFNFTCMEMKDSQQPHHASCSPEGLVRQVKMTAKTARVQLAGENALERYDWDGYGQVMETSRSDCGNGLVSFTYLRMNKRLFEEQNWRPFADFVRSMSEGGRRQRLPDYDTRGTDLYVAHIKGIHKHKQVQEEALV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0413 550 ProSitePatterns Beta-amylase active site 1. 168 176 IPR018238 GO:0000272|GO:0016161
Alju12g0413 550 SUPERFAMILY (Trans)glycosidases 86 514 IPR017853 -
Alju12g0413 550 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 59 519 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 256 278 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 142 160 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 331 350 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 439 461 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 121 135 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 367 383 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 384 395 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 402 425 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 164 185 IPR001554 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Plant beta-amylase signature 487 501 IPR001371 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Plant beta-amylase signature 405 415 IPR001371 GO:0000272|GO:0016161
Alju12g0413 550 PRINTS Plant beta-amylase signature 246 255 IPR001371 GO:0000272|GO:0016161
Alju12g0413 550 Gene3D Glycosidases 80 544 - -
Alju12g0413 550 Pfam Glycosyl hydrolase family 14 90 507 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0413 Alju-ChrAlju12 5031749 5033887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0413 1 550 Glycoside Hydrolase AT4G17090 68.468 0.0 787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0413 12 5031749 5033887 Alju12g0413 12 5031749 5033887 ECH