Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0370 ATGGCCATGGCGGTCACGAAGGACCCGCCATCACCGGCCTTTCTCGATACTATCGACGAGATTGCGAGAATTTACAGATCGCTTCCCCTTCGACCTTCGATTGAAGAAGTCGAAGCTGCGACTTCTGCTATGGAAACTATCAATAGCGAGGAGAATATGAAGCTGCAGGAAATCTCAATGCAGCAAGTCCGCGACGGTGTTCCCGAGCAGCTTTTCTCTCTGTTACAGGAATTGAAGAAGACCGTGGTCTTGTTCCAGAGCCATGAACAGAGGAAAGAAGCTCTTCACCTTCTTCAACAAGAGAAGATGTTTCAGACCCTCGGTGATCTTATTCAGAGGGCTTCTCAGTTCATTTCTGGGGAAGCTAGGGAACCGGAACCGCCCAATTTAGTCGAACCGGCGGGGAAAATCGAGATTGACGTTCGTATCGGTGATGACGGTCTGGTGAAGGGAAAGGAAGACGGAGATAAACCGGAGAAAATCAACCTCAACGTTGAAAGAAGATCGTCTGCTAAGACATCTTTCTCTGTTGATGATGGAAACTCTGAGAAACTAAGTCTCATGAAAGTGGCTACTGTTATTGCAAACTGTGCTAATAGTGGAGCAACAATCCTTGAGCTTAGAGGGAAACTTGTGGACCAGATGGAATGGTTGCCTGTTTCAATTGGGAAACTCTCTAATGTGTGTCAGATGGACCTATCTGAGAACAGAATCATGGCTCTTCCTTCCACCTTTGGGGAGCTCAAGGCCTTAACAAAGCTTGATCTTCATGCCAACCAGGTTATAAACCTTCCACACTCTTTTGGGGAATTGATCAACCTCACTGATCTTGACCTCCGCGGCAATAGGTTGAGATCACTGCCAGCTTCTTTTGAAAATTTGGAGAATCTCATTGATCTTGACCTGAGTTCAAATGAGTTCGCACAATTACCTGATTTGATTGGGAATTTAAGAAACTTGAGGAGATTAAACGTTGAGACAAACGAACTTGAGGAGCTACCTTATATGATTGGAAATTGCTCGTCACTCTCAGAGTTGAGATTAGACTTTAATCAGCTCAAAGCCCTTCCTGAGGCAATTGGGAATCTTGAGTTATTAGAGATTTTAACTCTGCACTATAACAGAGTTAAAAGGTTGCCTACTACAATGGGGAACCTGAGCAGATTGAAGGAACTTGATGCCAGCTTTAATGAACTGGAATTTGTACCAGAGAACCTATGTTTTGCTGTGAGTCTGAAGAAATTAAATGTTTCTAATAACTTTGCAGACCTAAGAGCCTTGCCAAAGTCAATTGGGAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAAATAAAAACATTACCAGAGTCTTTCAGGTTCTTGTCCAAATTGAGAGTTTTTCGTGCTGATCAGACTCCTCTTGAAGTACCACCCAGAGAAGTGGTCAAGTTGGGTGCTCAGGAAGCTGTGCAGTACATGGTCGATTTTGTAGCCAAGAGGGATGCGAAACTTCTGGTACCAAAGAAGAAGAAGAGGGGGTTTTGGCTCTGGTTTTGCACAATATTTTGCCCCCAACAGAGACGATTTTGA 1578 0.4398 MAMAVTKDPPSPAFLDTIDEIARIYRSLPLRPSIEEVEAATSAMETINSEENMKLQEISMQQVRDGVPEQLFSLLQELKKTVVLFQSHEQRKEALHLLQQEKMFQTLGDLIQRASQFISGEAREPEPPNLVEPAGKIEIDVRIGDDGLVKGKEDGDKPEKINLNVERRSSAKTSFSVDDGNSEKLSLMKVATVIANCANSGATILELRGKLVDQMEWLPVSIGKLSNVCQMDLSENRIMALPSTFGELKALTKLDLHANQVINLPHSFGELINLTDLDLRGNRLRSLPASFENLENLIDLDLSSNEFAQLPDLIGNLRNLRRLNVETNELEELPYMIGNCSSLSELRLDFNQLKALPEAIGNLELLEILTLHYNRVKRLPTTMGNLSRLKELDASFNELEFVPENLCFAVSLKKLNVSNNFADLRALPKSIGNLEMLEELDISDDQIKTLPESFRFLSKLRVFRADQTPLEVPPREVVKLGAQEAVQYMVDFVAKRDAKLLVPKKKKRGFWLWFCTIFCPQQRRF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0370 525 ProSiteProfiles Leucine-rich repeat profile. 296 317 IPR001611 GO:0005515
Alju12g0370 525 Gene3D Ribonuclease Inhibitor 170 490 IPR032675 -
Alju12g0370 525 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 184 420 - -
Alju12g0370 525 FunFam Plant intracellular Ras-group-related LRR protein 4 184 492 - -
Alju12g0370 525 SMART LRR_bac_2 340 359 - -
Alju12g0370 525 SMART LRR_bac_2 434 453 - -
Alju12g0370 525 SMART LRR_bac_2 317 336 - -
Alju12g0370 525 SMART LRR_bac_2 294 313 - -
Alju12g0370 525 SMART LRR_bac_2 409 430 - -
Alju12g0370 525 SMART LRR_bac_2 271 290 - -
Alju12g0370 525 SMART LRR_bac_2 363 382 - -
Alju12g0370 525 SMART LRR_bac_2 386 405 - -
Alju12g0370 525 Pfam Leucine rich repeat 265 306 IPR001611 GO:0005515
Alju12g0370 525 Pfam Leucine rich repeat 342 399 IPR001611 GO:0005515
Alju12g0370 525 ProSiteProfiles Leucine-rich repeat profile. 273 295 IPR001611 GO:0005515
Alju12g0370 525 SMART LRR_sd22_2 248 266 - -
Alju12g0370 525 SMART LRR_sd22_2 271 296 - -
Alju12g0370 525 SMART LRR_sd22_2 386 408 - -
Alju12g0370 525 SUPERFAMILY L domain-like 197 471 - -
Alju12g0370 525 SMART LRR_typ_2 271 293 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 317 340 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 434 456 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 225 247 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 294 316 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 386 409 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 363 385 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 248 270 IPR003591 -
Alju12g0370 525 SMART LRR_typ_2 341 362 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0370 Alju-ChrAlju12 4488602 4490721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0370 253 483 Receptor kinase-like Gene Family AT3G28890 32.794 1.04e-17 84.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0370 12 4488602 4490721 Alju12g0370 12 4488602 4490721 ECH