Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0106 ATGAGTTCTTTGAATCTCGGAGCTTGGACTCGTCCCAGTTCTATGCTCACCCAAGTGAGCGGATCCAGATCCCCTTCTTTACTTCTCTTTAATGGTCTCAGAAACTTGCCCATTTCCTTCATACCTTCAAAATCGCCCTCCCATGGAGTTTCTTCCCCCTGTTTTCCCTCTCTTTCCGTCTCAGCGGTGCTCACCAAGGAAAACGCCGTCAAGGATTCCGAGGAGGAAAAACCCGATTTCAATTTCGACGCCTACATGCTTGAGAAGGCTAATAAAGTGAACCAAGCCTTGGATGAAGCTATTGCGTTGAGAGAGCCTGAGAAGATTCACGAGGCGATGCGTTACTCGCTTCTCGCCGGCGGCAAGCGGGTGCGGCCAATGCTCTGTATCGCCGCGTGCGAACTCGTCGGCGGCAGCGAATCAGTGGCCATGCCCTCGGCTTGCGCCGTCGAGATGATTCATACCATGTCGCTGATTCACGACGACTTGCCCTGTATGGATAACGACGATCTCCGGCGAGGAAAACCGACTAATCACAAGGTCTTCGGTGAGGACGTGGCGGTTTTGGCCGGCGATGCCCTTCTGTCTTTCGCTTTCGAACACATCGCCGTTGGCACCGTGGGCGTCACGCCGGCGAGGGTGGTTCGTGCAATCGGGGAGCTGGCAAAGTCGGTGGGCGCCGAGGGGCTCGTCGCCGGGCAAGTTGTGGATATAGCATCGGAGGGATTGTCCGATGTGGGACTTGAAAAGCTCGAATTCATTCATCTCCACAAAACGGCGGCGTTGTTGGAAGCCGCCGTTGTGCTGGGAGCAATCGTGGGAGGTGGGTCAGACGAAGAAATTGAGAAACTGAGGAAGTTCGCTAGGTACATCGGATTGCTGTTCCAGGTTGTCGACGACATCCTCGACGTGACCAAATCATCCGAGGAATTGGGGAAAACTGCAGGGAAGGACTTGGTGGCAGATAAGACCACGTATCCGAAACTTCTGGGGATAGAGAAATCGAGGGAATTCGCAGAAAAATTGAATCAGGACGCTCAAGACCAGCTCTCTGGGTTTGATCCGAAGAAAGCTGCACCATTAGTTGCTTTGGCCAACTACATTGCTTACAGGCAGAACTAG 1122 0.5348 MSSLNLGAWTRPSSMLTQVSGSRSPSLLLFNGLRNLPISFIPSKSPSHGVSSPCFPSLSVSAVLTKENAVKDSEEEKPDFNFDAYMLEKANKVNQALDEAIALREPEKIHEAMRYSLLAGGKRVRPMLCIAACELVGGSESVAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHIAVGTVGVTPARVVRAIGELAKSVGAEGLVAGQVVDIASEGLSDVGLEKLEFIHLHKTAALLEAAVVLGAIVGGGSDEEIEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNQDAQDQLSGFDPKKAAPLVALANYIAYRQN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0106 373 SFLD Isoprenoid Synthase Type I 84 371 - -
Alju12g0106 373 CDD Trans_IPPS_HT 105 371 IPR000092 GO:0008299
Alju12g0106 373 SUPERFAMILY Terpenoid synthases 84 354 IPR008949 -
Alju12g0106 373 SFLD Polyprenyl Transferase Like 84 371 - -
Alju12g0106 373 ProSitePatterns Polyprenyl synthases signature 1. 158 174 IPR033749 -
Alju12g0106 373 FunFam Geranylgeranyl diphosphate synthase 79 373 - -
Alju12g0106 373 ProSitePatterns Polyprenyl synthases signature 2. 291 303 IPR033749 -
Alju12g0106 373 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 65 373 - -
Alju12g0106 373 Pfam Polyprenyl synthetase 107 343 IPR000092 GO:0008299
Alju12g0106 373 Gene3D Farnesyl Diphosphate Synthase 74 373 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0106 Alju-ChrAlju12 1327283 1328404 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0106 12 1327283 1328404 Alju12g0106 12 1327283 1328404 ECH