Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0095 ATGAATTTTTCTACTAATTGTAATCTATCTATACAAGACGGCTTTTTGTGTCAAAAACAAGATAAGTTACAGCTCCCAAGTCTGCCAGCTGCAAAAACCTCCAATTCTTCCTTCTCTTTCTCTCTCAAACCAGATTTGTACGTCGATTTCTCTCTGCAAATCCGATCCTTCACTTCTCTCCCTTTTACGTTTCCCGAGTTCTTGATCTTGAATATGATTAAACTATTTAAAGTAAAGGAAAAACAGAGGGAACTTGCAGAGAATGCAAGTGGTGGAGCACCGATTAAGAAGCAAACTGCTGGGGAGTTGCGTCTTCACAAAGATATAAGTGAGCTGAATCTACCAAAATCTTGTGCCATGCAATTCCCCAATGGTAAAGATGACCTGATGAACTTTGAAGTTTCAATTCGGCCTGATGAAGGATATTATATGGGTGGTACATTTTTGTTTTCCTTCCAAGTGTCTCCCATCTATCCTCATGAGGCACCAAAAGTCAAGTGCAAGACAAAGGTCTACCATCCTAATATCGACTTGGAAGGAAATGTTTGCCTCAACATCTTGCGAGAAGATTGGAAACCTGTTCTGAATATAAACACAGTCATTTATGGATTGTATCATCTTTTCACTGAGCCAAATTATGAGGACCCTCTCAATCATGATGCGGCGGCAGTTTTGAGAGAGAATCCCAAATTGTTCGAGTCTAATGTAAGGAGGGCTATGGCTGGTGGGTACGTGGGGCAAATCTTTTTCCCTCGCTGTATGTAA 765 0.4065 MNFSTNCNLSIQDGFLCQKQDKLQLPSLPAAKTSNSSFSFSLKPDLYVDFSLQIRSFTSLPFTFPEFLILNMIKLFKVKEKQRELAENASGGAPIKKQTAGELRLHKDISELNLPKSCAMQFPNGKDDLMNFEVSIRPDEGYYMGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKLFESNVRRAMAGGYVGQIFFPRCM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0095 254 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 100 245 IPR000608 -
Alju12g0095 254 SMART ubc_7 103 245 - -
Alju12g0095 254 Gene3D Ubiquitin Conjugating Enzyme 96 254 IPR016135 -
Alju12g0095 254 SUPERFAMILY UBC-like 95 252 IPR016135 -
Alju12g0095 254 FunFam NEDD8-conjugating enzyme Ubc12 96 254 - -
Alju12g0095 254 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 128 231 - -
Alju12g0095 254 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 172 187 IPR023313 -
Alju12g0095 254 CDD UBCc 104 238 IPR000608 -
Alju12g0095 254 Pfam Ubiquitin-conjugating enzyme 104 239 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0095 Alju-ChrAlju12 1172544 1176180 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0095 12 1172544 1176180 Alju12g0095 12 1172544 1176180 ECH