Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0071 ATGTTCCTCTTTAGAAAGCAAACCCAGAATCAAGAGGAGAATGATCCCTCCCATAAAGATGCAAAGGTGGCTGAACTGAGGGATGCTCTGGGGCCATTATCTGGGCGAAGTCAAAAGTATTGCACAGACGCTTGCCTGAGGAGATATTTAGAAGCCAGAAACTGGAACATTGATAAAGCCAAGAAAATGTTGGAAGAAACACTCAAATGGAGATCCACTTATAAGCCTGAGGAAATCCGTTGGCCTCAAGTGGCACATGAGGGTGAGACAGGAAAAGTGTCAAGAGCAAATTTTCATGATCGTTCTGGAAGAACTGTGCTTATAATGAGGCCGGGATTACAGAACACGACATGTCCAGAAGATAATATCAAGCATTTAGTGTACCTCATGGAAAATGCTATCCTTAATCTCCCCGAAGGGCAACAACAGATGTCGTGGCTGATAGACTTCACTGGATTTTCACTCAGCACTAGCATTTCTGTCAAAACGGCTCGTGATATCATTTACATCTTACAAAATCACTATCCTGATAGGCTTGGTCTTGCTTTTTTGTACAGTCCACCAAGGCTATTTCAAGCTTTTTGGAAGGCTGTGAGATACTTCTTGGATCCCATCACATTCCAGAAGGTAAAATTTGTTTATCCTAAGGACAAGGAGAGTGAAGAGCTGATGAAATCACTGTTTGATGTGGAAAATCTTCCCAGTGAGTTTGGAGGAAAAGCAACATTGAAGTATGATCATGAAGAATTTTCAAGGATGATGATAGAAGATGATGCAAAAACTGCTAAATTCTGGGGAGTTGATGACAAGCTATTCCACACTAAGAATGGCCATTCTAGTACAGAGGTAGTGCCAGAACCAGTGACGATTTGA 873 0.4181 MFLFRKQTQNQEENDPSHKDAKVAELRDALGPLSGRSQKYCTDACLRRYLEARNWNIDKAKKMLEETLKWRSTYKPEEIRWPQVAHEGETGKVSRANFHDRSGRTVLIMRPGLQNTTCPEDNIKHLVYLMENAILNLPEGQQQMSWLIDFTGFSLSTSISVKTARDIIYILQNHYPDRLGLAFLYSPPRLFQAFWKAVRYFLDPITFQKVKFVYPKDKESEELMKSLFDVENLPSEFGGKATLKYDHEEFSRMMIEDDAKTAKFWGVDDKLFHTKNGHSSTEVVPEPVTI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0071 290 FunFam Phosphatidylinositol transfer protein 3 3 274 - -
Alju12g0071 290 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Alju12g0071 290 Gene3D - 3 281 IPR036865 -
Alju12g0071 290 MobiDBLite consensus disorder prediction 1 20 - -
Alju12g0071 290 Pfam CRAL/TRIO domain 94 239 IPR001251 -
Alju12g0071 290 CDD SEC14 99 240 IPR001251 -
Alju12g0071 290 PANTHER GH16843P 8 273 - -
Alju12g0071 290 SMART sec14_4 87 242 IPR001251 -
Alju12g0071 290 SUPERFAMILY CRAL/TRIO N-terminal domain 8 81 IPR036273 -
Alju12g0071 290 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Alju12g0071 290 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Alju12g0071 290 SUPERFAMILY CRAL/TRIO domain 81 257 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0071 Alju-ChrAlju12 901830 904079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0071 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 25.481 7.23e-10 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0071 12 901830 904079 Alju12g0071 12 901830 904079 ECH