Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0069 ATGATAAAAGCCGTAATGGTGATGAACACGCAGGGGAAGCCCCGTCTTGCCAAATTTTATGAATTTTGGCCTGTGGAGAAGCAGCAGGAACTAATACGTAATGTGTTTTCAGTCTTGTGCAGTAGAGCTGAAAATGTTAGTAGTTTTGTGGATGCTGAGTCCATCTATGGTCAGGATGCTCGCCTTGTCTACAAGCACTTTGCAACTTTATACTTCGTGTTCATATTTGATAGTTCTGAAAATGAGCTGGCTATGCTTGACTTAATACAAGTCTTTGTTGAAACACTGGACAAATGCTTCAGAAATGTTTGTGAACTTGACGTAGTGTTCAACTATAGCAAGATGCTTTCTATTCTGGATGAGATTATCATTGGAGGCCAGGTTTTGGAAACAAGTTCAAGCGAGGTTATGAAGGCTATTGAAGAATTGTCAAGGCTTGAAGCGGCCTCCAATTCTATCAACCTTGTTCCAAAATCTGTTTCTGGTTGGAGGGCGCGGTAG 501 0.4152 MIKAVMVMNTQGKPRLAKFYEFWPVEKQQELIRNVFSVLCSRAENVSSFVDAESIYGQDARLVYKHFATLYFVFIFDSSENELAMLDLIQVFVETLDKCFRNVCELDVVFNYSKMLSILDEIIIGGQVLETSSSEVMKAIEELSRLEAASNSINLVPKSVSGWRAR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0069 166 SUPERFAMILY SNARE-like 1 144 IPR011012 -
Alju12g0069 166 Coils Coil 129 149 - -
Alju12g0069 166 FunFam AP complex subunit sigma 1 156 - -
Alju12g0069 166 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 147 IPR016635 GO:0015031
Alju12g0069 166 PIRSF AP_complex_sigma 1 156 IPR016635 GO:0015031
Alju12g0069 166 ProSitePatterns Clathrin adaptor complexes small chain signature. 62 72 IPR000804 GO:0006886|GO:0016192|GO:0030117
Alju12g0069 166 Gene3D - 1 159 - -
Alju12g0069 166 CDD AP3_sigma 1 145 IPR027155 GO:0006896|GO:0030123
Alju12g0069 166 Pfam Clathrin adaptor complex small chain 1 146 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0069 Alju-ChrAlju12 898268 900731 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0069 12 898268 900731 Alju12g0069 12 898268 900731 ECH