Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0022 ATGGCCGGTCTCCCTCCTCCTCTGTTTTCTCTGGTTTTGATTCTTTCTGCTTCTTGGTCGCTTTTTCCGGCAGAATCAACCACATATTGGGGTGATATAGAGGCTCTGAAGCAACTCAAGAATGGCCTTCACAATGCTTCCTTGAATCCAGGTTCATGTGTTACTTCGTGGGACTTTTCTGTCGACCCTTGCGACAACCTCTGTAGCCAAAAATTCACGTGCGGCTTCCGGTGCGACGCTGTCATCTCCGGGTCGAGTCGGGTCACCGAAATAACACTGGACCAGGTGGGTTACGCCGGCTCACTCGCATCCTCGTCTTGGAACCTTCCTTATTTAGAAACTCTCGATGTCTCTAACAACTACCTTTCCGGGGGCATTCCTGAGTCCCTCTCCAACTTGACCCGTCTTCGCCGGCTCGCTCTCTCCGGGAATTTGTTGGGCGGTGAGATTCCCTCTTCCATTGGCTTCCTCTCCAAACTTGAAGAGCTTTACCTTGATAACAATAATCTTCAAGGGACAGTCCCTTCTAGCTTGAACGGGCTCAAGAGCTTGAGAAGGCTCGAACTTCAACTCAACAATCTCACAGGTGAGATTCCTGATCTTGGTTCTCTCGAAAGCCTTTACTATCTCGACATCAGCAACAACGCCGTCACTGGCGGAATCCCGGCGACGTTGCCCAAATCCTTAATTCAAATTTCAATGAGGAACAATAGCTTGAGCGGAGGTTTAAGATCGGAAAGCTTCAGGAGCTTGATGGATTTGCAGGTTTTGGATTTGAGTTATAACAGTCTGAAGGACTCTGTACCCGTAGTACTGTTTGAGCTTCCTTCGCTGGAGCAGCTGACGCTGTCGTTCAACAAATTCTCGTCGGTGGAAGCGCCGTCTTACAATGCGGGATCACAGAGTGGGCTGATAGCGGCTGATCTGAGCAACAATGAGATTGAAGGGCTGTTGCCTTGGTTCATGGGAGTGATGCCGAAGCTGTCGGCATTGTCGTTAGAGAACAATAAGTTTACGGGAATGATTCCGACGCAGTATGCGTTGAAGACGGTGTTGCCGGAAGTGGGAGTATCGCCGTTTGGGAGGCTAATACTGAGCGGGAATTACCTGATTGGGGGCATACCCAGCCCCTTGCTGCTACTCAAACCGGGTTCTGCAAATGTGACACTAGCGGACAATTGTTTGTTCAGATGCCCGCTGAGGTTCTTTTTCTGCGACCAACAAAAATCGTTGGACGTATGCAACAGATTTAGCCCTTTCATCCCTTAG 1269 0.4972 MAGLPPPLFSLVLILSASWSLFPAESTTYWGDIEALKQLKNGLHNASLNPGSCVTSWDFSVDPCDNLCSQKFTCGFRCDAVISGSSRVTEITLDQVGYAGSLASSSWNLPYLETLDVSNNYLSGGIPESLSNLTRLRRLALSGNLLGGEIPSSIGFLSKLEELYLDNNNLQGTVPSSLNGLKSLRRLELQLNNLTGEIPDLGSLESLYYLDISNNAVTGGIPATLPKSLIQISMRNNSLSGGLRSESFRSLMDLQVLDLSYNSLKDSVPVVLFELPSLEQLTLSFNKFSSVEAPSYNAGSQSGLIAADLSNNEIEGLLPWFMGVMPKLSALSLENNKFTGMIPTQYALKTVLPEVGVSPFGRLILSGNYLIGGIPSPLLLLKPGSANVTLADNCLFRCPLRFFFCDQQKSLDVCNRFSPFIP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0022 422 Gene3D Ribonuclease Inhibitor 32 201 IPR032675 -
Alju12g0022 422 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Alju12g0022 422 SMART LRR_typ_2 157 180 IPR003591 -
Alju12g0022 422 SMART LRR_typ_2 325 348 IPR003591 -
Alju12g0022 422 SMART LRR_typ_2 109 133 IPR003591 -
Alju12g0022 422 SMART LRR_typ_2 251 274 IPR003591 -
Alju12g0022 422 SMART LRR_typ_2 275 298 IPR003591 -
Alju12g0022 422 SMART LRR_typ_2 181 204 IPR003591 -
Alju12g0022 422 PRINTS Leucine-rich repeat signature 251 264 - -
Alju12g0022 422 PRINTS Leucine-rich repeat signature 112 125 - -
Alju12g0022 422 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 410 - -
Alju12g0022 422 Pfam Leucine rich repeat 235 288 IPR001611 GO:0005515
Alju12g0022 422 Pfam Leucine rich repeat 159 216 IPR001611 GO:0005515
Alju12g0022 422 Pfam Leucine rich repeat 108 146 IPR001611 GO:0005515
Alju12g0022 422 FunFam Nuclear pore complex protein NUP107 30 200 - -
Alju12g0022 422 SUPERFAMILY L domain-like 83 349 - -
Alju12g0022 422 Gene3D Ribonuclease Inhibitor 202 422 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0022 Alju-ChrAlju12 390360 391628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0022 21 378 Receptor kinase-like Gene Family AT2G25790 34.066 1.58e-32 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0022 12 390360 391628 Alju12g0022 12 390360 391628 ECH