Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0870 ATGAGGAGGCTCATGAAAAAGATGTCTTCCAATATGGCAACATGGGGATGGGGCGCCATTTTTTGCTGGGATGGGCCTTTTGACTTCGGACCAACGCGCCGGAAAAGCACGTGCGAATATCCTTTCCTTCCCCATCGTCTTTCTCACCTTCCTTGCACCGATCCTCTTATTAAACCTCCACGGTCCAGATATATATATGACGCAATCCCATTAACCCACGTTGCGCGACCTTTCCCTTCCAATCCCACGAATAGACACCCCAAGGCAATTCTGAAAGTCGGAGAGGAACCTCAACAAAAACCCTCAGAGGTTCGATCCTCTTGTACTTCCCTGACCCTCGTTCCCTCGTTGGATAATTGCGTTTTTCAATTTGGAATTTGGGGATCAGGGTCGGTGGAGGGAATTGGAAGAAGAAAGGTGGAACAATTTGGTATTCTGACGATGTCTGCTGCAGTTTGTGGAAGCAAGAGATCTTTCTTTGAAGATATTCCTCCGTCGCCTCCAGTATCTAAGAGGCTTCGTTGCTCATCTTCTCCAATTCGTTTCTCCGCTCCGAGCCTCGTTGATCAGCTTCAGGCGGTGTTCCCTCAAATGGAAGTTCAGCTTCTTGAGACAGCCCTGCAAGAATGTGGAAATGATCTAGATGTTGCTATCAAAACCTTGCATGAGCGTTGCTTGGGATCTACTGATGGAAATTCTGGTGCTACTGAACAATCCGATGCTAATGGGGTAACAGGTACTTTGAGAGATGGTGGGCATGCTTCTGCTTCTGAGAACCAATCAGCTTCAAATGACCTTCCTGCAGATGGAGCAGAATGGGTTGACTTGTTTGTGAGGGAAATGATGAGTGCTATTAGTGTTGACGATGCTAGAATCCGTGCTTCTAGAATATTGGAGGTTTTAGAGAGATCAATCAGTGGGCGTGCAAGTGCTGAGGCAACACATGTTATTCAAAAGGAGAATATGATGTTGAAAGAGCAAATTGAAGGGCTGACTAAGGAGAATATTATTTTAAAGAGCGCTTTTAAAATCCAGCATGAACGTCAGATTGAGTATGAAAATAAGAGTCAAGAGTTGCAGCATTCGAAGCAGTTGATTTCTCAATACCAGGAGCAGCTGAGAACTCTTGAGGTGAATAACTATGCGTTGGCAATGCATCTGAAGCAGGCTCAGCAGTGCAACTCCTTCCCAGGCCGGTTCCATCCTGACGTCTTCTAA 1218 0.4606 MRRLMKKMSSNMATWGWGAIFCWDGPFDFGPTRRKSTCEYPFLPHRLSHLPCTDPLIKPPRSRYIYDAIPLTHVARPFPSNPTNRHPKAILKVGEEPQQKPSEVRSSCTSLTLVPSLDNCVFQFGIWGSGSVEGIGRRKVEQFGILTMSAAVCGSKRSFFEDIPPSPPVSKRLRCSSSPIRFSAPSLVDQLQAVFPQMEVQLLETALQECGNDLDVAIKTLHERCLGSTDGNSGATEQSDANGVTGTLRDGGHASASENQSASNDLPADGAEWVDLFVREMMSAISVDDARIRASRILEVLERSISGRASAEATHVIQKENMMLKEQIEGLTKENIILKSAFKIQHERQIEYENKSQELQHSKQLISQYQEQLRTLEVNNYALAMHLKQAQQCNSFPGRFHPDVF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0870 405 Coils Coil 352 379 - -
Alju11g0870 405 CDD CUE 186 221 - -
Alju11g0870 405 Pfam CUE domain 186 218 IPR003892 GO:0043130
Alju11g0870 405 SUPERFAMILY UBA-like 186 228 IPR009060 GO:0005515
Alju11g0870 405 ProSiteProfiles CUE domain profile. 183 229 IPR003892 GO:0043130
Alju11g0870 405 MobiDBLite consensus disorder prediction 252 266 - -
Alju11g0870 405 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 148 405 - -
Alju11g0870 405 MobiDBLite consensus disorder prediction 228 266 - -
Alju11g0870 405 MobiDBLite consensus disorder prediction 228 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0870 Alju-ChrAlju11 10294806 10299899 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0870 11 10294806 10299899 Alju05g1507 05 45198552 45203153 CCT
Alju11g0870 11 10294806 10299899 Alju11g0870 11 10294806 10299899 ECH