Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0632 ATGAACGGTGGCGATGAGGTCGTCGCAGCTCCGGCGGGTCTACCGCAGCCGCTGGAGTGGAAATTCTCGCAGGTTTTTGGTGAACGTACGGCCGGGGAGGAAGTTCAGGAAGTGGATATAATTTCTGCCATTGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTAGTTCTATTTGAGAGGACAGACACGAAAGATCATGGAGGATCAAGAAGGGATTTGGAAAGCGTGGATTATACAATAAGTAGGCATCCTGAGTTCCGATATAAAACCGAGTTTCAGAGTCATGAACCTGAGTTCGATTACCTAAAGAGCTTGGAAATTGAAGAGAAAATAAACAAAATCAGATGGTGCCAAACAGCTAATGGTGCCTTGTTTCTTCTATCTACGAATGATAAAACCATCAAATATTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAATATCTGAGATGAATGTTGACCCATCAAAAGCAATAGCGAATGGCTGTATCAGCAGCATTGCTAGTTCAAGTAATTCGAGTAGCCCTAGGCCATATCTTGCCAATGGAGGATCTCCAGATAAATCATACAGCTATCTGACCAATGACTTCTCCTTTCCACCTGGGGGCATCCCATCGTTAAGATTACCTGTGGTAACCAGCCATGAGACCAGCCTCGTAGCTCGATGTCGTAGAGTATATGCCCATGCTCATGATTATCATATCAACTCGATATCAAGTAACAGTGATGGCGAAACTTTCATATCTGCTGATGATTTGCGGATAAATCTGTGGAACCTAGAAATTAGCAATCAAAGTTTTAATATTGTAGATGTAAAGCCTGCAAACATGGAGGATCTGACTGAGGTTATAACATCTGCCGAGTTTCATCCTACCCATTGTAATATGTTGGCTTATAGCAGTTCAAAGGGTTCAATCCGTCTTGTTGATCTGCGCCAATCAGCATTGTGTGATACTCACGCCAAATTGTTTGAGGAACAGGAGGCCCCAGGGTCCAGGTCCTTTTTTACGGAGATTATTGCTTCGATTTCAGATATAAAATTCGGGAAGGATGGAAGATATATTCTTAGTCGTGATTACATGACTCTAAAGTTGTGGGACATTAATATGGATTCTGGCCCAGTTGCGACTTTCCAGGTTCATGAATATCTAAGACCTAAGCTATGTGATTTATATGAAAATGATTCAATTTTTGACAAGTTCGAGTGTTGTTTGAGTGGCGATGGGTTGCGTGTAGCAACTGGCTCTTACAGCAACCTATTCCGTGTGTTTGGCTGCACCCCAGGAAGTGCTGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGGCGACAAGTTCAGACCCCTGCAAGGCCAGCTAGATCACTGGGAAGTAGTTTAACTCGAGTTGTAAGGCGAGGAGCTGATAGTCCGGGTGTTGATGCGAATGGGAACTCTTTTGATTTCACGACAAAGTTGCTGCACTTAGCATGGCACCCAACCGAAAATTCAATTGCCTGTGCTGCTGCAAATAGTTTGTACATGTACTATGCATAA 1557 0.4335 MNGGDEVVAAPAGLPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGGSRRDLESVDYTISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNVDPSKAIANGCISSIASSSNSSSPRPYLANGGSPDKSYSYLTNDFSFPPGGIPSLRLPVVTSHETSLVARCRRVYAHAHDYHINSISSNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSALCDTHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCTPGSAEATTLEASKNPMRRQVQTPARPARSLGSSLTRVVRRGADSPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0632 518 PIRSF PPA2_B55 10 518 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 36 200 - -
Alju11g0632 518 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Alju11g0632 518 SMART WD40_4 377 431 IPR001680 GO:0005515
Alju11g0632 518 SMART WD40_4 276 316 IPR001680 GO:0005515
Alju11g0632 518 SMART WD40_4 105 145 IPR001680 GO:0005515
Alju11g0632 518 SMART WD40_4 31 66 IPR001680 GO:0005515
Alju11g0632 518 SMART WD40_4 226 265 IPR001680 GO:0005515
Alju11g0632 518 SMART WD40_4 335 373 IPR001680 GO:0005515
Alju11g0632 518 Gene3D - 35 200 IPR015943 GO:0005515
Alju11g0632 518 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 16 518 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 SUPERFAMILY WD40 repeat-like 39 510 IPR036322 GO:0005515
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 237 264 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 293 321 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 322 349 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 404 430 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 350 377 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 487 516 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 265 292 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 378 403 IPR000009 GO:0000159|GO:0019888
Alju11g0632 518 Gene3D - 217 513 IPR015943 GO:0005515
Alju11g0632 518 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 212 514 - -
Alju11g0632 518 Pfam WD domain, G-beta repeat 229 265 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0632 Alju-ChrAlju11 7139236 7145943 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0632 11 7139236 7145943 Alju05g1773 05 49087793 49095086 CCT
Alju05g1773 05 49087793 49095086 Alju11g0632 11 7139236 7145943 ECH
Alju11g0632 11 7139236 7145943 Alju11g0632 11 7139236 7145943 ECH