Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0599 ATGGCAAATAGTGAGGGGAGCTGTTCAACTCAGCTCATAGATGGAGACGGCACATTCAATGTTGAAGGAATGGAAAGGTTTATGAAGGAAGTCAAATTGGGCGAATGTGGGCTTTCCTATGCTGTAGTTTCCATTATGGGTCCTCAGAGTAGTGGGAAGAGCACGCTATTAAATAAATTGTTCAGAACAGACTTCAATGAGATGGATGCTTTTAAAGGGAGGTATATGATTATATGCCTTTTCATTCCCAATAATTTACATGACTTTTCGCTCATTAACACGTCTCAAACAACTAAAGGAATTTGGATGGCAAAATGTGCAGTTATAGAGCCTTTTACACTTGTCATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGATGATACGGCATTTGAAAAGCAGAGTGCTCTTTTTGCTCTTGCTGTTTCAGATATAGTGCTAATAAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTGTTGAAAACTGTCTTTCAAGTTATGATGAGATTGTTTAGCCCACGCAAAACAACATTGTTGTTTGTCATTCGTGATAAGACAAGAACACCCCTTGAAAATTTAGAACCTGTTCTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAGCCACAAGCTCACATGGAAACTCCATTAAGCGAATTCTTTAATGTTGAAGTTGTTGCTCTTTCTAGTTTTGAGGAAAAGGAAGAGCAATTTAAGGAGCAGGCTGCCGAATTGAGGCAACGATTCCAACATTCTATTGCTCCTGGCGGGCTTGCAGGAGATCGACGTGGAGTAGTTCCTGCTTCAGGCTTTTCTTTTAGTGCACAGCAAATTTGGAAGATCATTAAGGAAAACAAGGATCTGGACCTTCCTGCTCATAAGGTCATGGTTGCCACTGTAAGATGTGAAGAAATAGCCAATGAGAAGTATGCTGCTTTCATTGCCAATGAGGACTGGCATGAATTGGAAGAGGCTGTGCCATCTGGCCCAGTTCCTGGATTTGGCAAAAGGCTCAGTTCACTCCTTGGCTCTTGTCTGTCAGAGTATGATTTAGAAGCCACTTATTTTGATGAAGGTGTCAGATCTGCAAAACAAAAGCAGCTTCAAGAAAAATTGTTGCAACTTGTCCAACCAGCATTCCAAACAGTGCTGGGACGTATAAGGTCTGAAATTATGGAAAAGTACAAGGAAACACTTGACAAGGCTTTGAAAGGAGGGGAAGGGTTTTCTGCTGCTGCTAATAGATGCACAATGTCTTTTATGGCTCAGTTTGATGAAGCTTGTGCAGATGTAGTAATTGAACAAGCAGACTGGGATACATCTAAGCCAAGGGAGAAACTCCACCGTGATATTGATGCATATGTTGCTTCTGTTCGTGCAGCTAAGCTGTCTGAACTCACTTCATCATATGAGGAAAAATTGAAAGAAGCTTTATCTGGACCTATTGAAGCACTTCTGGATGGAGCTAATAGTGATACATGGCCAGCAATAAGGAATCTTCTCAAGCGTGAGACTGAATCTGCAGTATCAAGCTTCTCTACTGCACTTTCTGGGTTTGATATGGATGAACAAACAAGAAGGAACATGATCACAAGTCTAGAGGATTATGCAAAGGGTGTAGCAGAAGCAAAGGCAAGGGAAGAATCTGCAAGAGTTCTGATCCGTATGAAGGACAGGTTTACGACATTGTTTAGCCATGATTCAGATTCGATGCCTCGAGTTTGGACGGGGAAGGAAGATATTCGAGGCATCACCAAGACCGCCCGCTCTGCTTGCTTGAAGTTGCTATCAGTTATGGTAGCTATTCGTTTAGATGCAAATTCTGATAATATTGAGAAAACATTAGCAGTTGCATTGTTGGATCCTCCAAGTTCTAAGAAAGATAGAAGCATTGCAACAGTTGATCCTTTGGCTTCAAGCTCCTGGGCAGAGATTCCTTCTTCAAAAACCTTGATCACACCAGTACAGTGCAAAAATTTGTGGAGACAATTCAAGACAGAGACTGAATACAGTGTCACACAAGCTATTTCTGCACAGGAGGCCCATAATCGTAGTAACAACTGGTTACCACCTCCATGGGCTATTGTTGCTTTACTTGTTCTGGGATTCAATGAATTTATGACAGTTCTAAGAAACCCCTTGTATTTTGGTGTCATCTTCATTGGTTTTCTTGTGGGAAAAGCCCTATGGGTGCAGCTAGACATCTCAAATGAATTCCGCCATGGAATGCTTCCAGGAATGATATCGTTGTCAGCCAAGTTTCTTCCAACAGTATTGAGCATTATCAGAAAACTAGCAGAACAGGCACAGAATCCTCCTCCAACTAACAACGATCCTCAGAGAAAGCCATCAAAAACCAATCAAAATTCTGTTACTGTCAGTAGGAACACTACTGAGTCTAGTATTGCTTCATCTAATTTAACTTCTTTGGACAAAGGACCCAAATATGAGTAG 2484 0.4167 MANSEGSCSTQLIDGDGTFNVEGMERFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNKLFRTDFNEMDAFKGRYMIICLFIPNNLHDFSLINTSQTTKGIWMAKCAVIEPFTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHMETPLSEFFNVEVVALSSFEEKEEQFKEQAAELRQRFQHSIAPGGLAGDRRGVVPASGFSFSAQQIWKIIKENKDLDLPAHKVMVATVRCEEIANEKYAAFIANEDWHELEEAVPSGPVPGFGKRLSSLLGSCLSEYDLEATYFDEGVRSAKQKQLQEKLLQLVQPAFQTVLGRIRSEIMEKYKETLDKALKGGEGFSAAANRCTMSFMAQFDEACADVVIEQADWDTSKPREKLHRDIDAYVASVRAAKLSELTSSYEEKLKEALSGPIEALLDGANSDTWPAIRNLLKRETESAVSSFSTALSGFDMDEQTRRNMITSLEDYAKGVAEAKAREESARVLIRMKDRFTTLFSHDSDSMPRVWTGKEDIRGITKTARSACLKLLSVMVAIRLDANSDNIEKTLAVALLDPPSSKKDRSIATVDPLASSSWAEIPSSKTLITPVQCKNLWRQFKTETEYSVTQAISAQEAHNRSNNWLPPPWAIVALLVLGFNEFMTVLRNPLYFGVIFIGFLVGKALWVQLDISNEFRHGMLPGMISLSAKFLPTVLSIIRKLAEQAQNPPPTNNDPQRKPSKTNQNSVTVSRNTTESSIASSNLTSLDKGPKYE 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0599 827 MobiDBLite consensus disorder prediction 779 821 - -
Alju11g0599 827 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 74 - -
Alju11g0599 827 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 89 301 - -
Alju11g0599 827 CDD GBP 36 262 - -
Alju11g0599 827 Gene3D - 12 265 IPR027417 -
Alju11g0599 827 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 293 - -
Alju11g0599 827 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 272 IPR030386 GO:0005525
Alju11g0599 827 Coils Coil 238 258 - -
Alju11g0599 827 Hamap Protein SEY1 [SEY1]. 9 787 IPR008803 -
Alju11g0599 827 MobiDBLite consensus disorder prediction 777 827 - -
Alju11g0599 827 Pfam Sey1 three-helix bundle domain 343 778 IPR046758 -
Alju11g0599 827 PANTHER PROTEIN SEY1 5 800 IPR008803 -
Alju11g0599 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0599 Alju-ChrAlju11 6735197 6743808 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0599 11 6735197 6743808 Alju05g1791 05 49303847 49313100 CCT