Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0598 ATGGCTTCAGTTAGTACAATCAAATTCTTGATCTGTTTAGTTTTTTGCCTCTTCACCTCTCCAGCTTCTTGTCAAGGAAAGAAGAACAGGTTGAATCAAAATGGGTATCGATTCATCAGAAAGGCGAGCTCATTCACGCCATCTTCACCGATTTCAACGAAATGGAACAGTGAGGGGTATGATTATATCATAGTGGGAGGTGGAACTGCGGGCTGCCCTTTGGCTGCGACATTATCGGAGAAATTCAGAGTATTGGTGCTGGAGAGGGGAGGAGTGCCGTTTAACAATCCGAATGTGTCTTTTATGGAGAATTTTCACATTACCTTAGCGGATACTTCTGCAACTTCGGCTTCTCAGTACTTCATTTCAACCGACGGAGTCCTCAATGCCAGAGCTAGGGTTCTCGGTGGTGGTAGCTCCATTAATGCCGGTTTTTACACCAGAGCAAGCTCCAGGTTTATAGAGAAAGTGGGGTGGGATGCGAAGGTGGTGAACGAGTCATACCCATGGGTTGAGAAGCAAATAGTCTATCGCCCAAAGATCGCACCTTGGCAGCAAGCAGTGAGAGATGGCCTTCTAGACGTCGGTGTCTCTCCTTTCAATGGCTTCACCTTCGATCATGTCCATGGCACCAAGGTCGGCGGCACCATCTTCGATCGTTTCGGCCGCCGCCACTCCGCCGCCGAACTTCTTGCTTCTGCAAACCCTCGAAAACTCTCTGTTCTCACCTATGCCACTGTCCACAAAATCGCCTTTGAGACAAGAGGGAAAAGGCCAAAAGCTGTGGGGGTAATTTTTAAAGATGAGAATGGGAAGCAGCATGAGGCATTTCTGAGGAATAATAGGCAGAGTGAGGTAATAGTGTCGTGTGGGGCTATTGGGACACCTCAATTACTTATGCTAAGTGGGATTGGTCCTAAAGAGGAACTTGAGAGATTGAATATCACAGTGGTGCTTGATAACCCATATGTTGGGAAGGGCATGGCTGATAATCCCTTGAACACCATTTTTGTGCCGTCTAAGAGGCCTGTGAGGCAGTCTCTCATTGAAACAGTGGGTATCACCAACATGGGAGTGTACATTGAGGCTAGCAGTGGCTTTGGTCAGTCCAATGATAGCATCCACTGTCATCATGGTATCTTGTCTGCTGAGATTGGGCAGCTCTCCACAATTCCTCCTCATAAGAGATCACCAGAAATTGTTCAAGAGTATGTCAAAAGCAAGCAAGAAATACCAGTTGAAGCATTCAGGGGAGGCTTCATCCTGTCAAAAGTAGCAAGTCCTTGGTCAACAGGTGAGCTCAAGCTGATCAACACCAATGTAGAAGACAACCCTTCTGTGACCTTCAACTACTTCAACCATCCATATGATGTTCAGCGTTGTGTCGAGGGGATTCGAATGGCAGCTAAGGTTGTACACTCGAATCGGTTCACAAACTACACTTTGTGTGACAAAGACAGTACTGAGACACTTCTTAACCTCACAGTGAAGGCTAATGTCAACCTAGTACCCAAGCATGTCAATGACACAAAGTCACTACAACAGTTCTGCAAAGACACTGTGATCACTATTTGGCATTACCATGGTGGTTGCCATGTTGGGCAGGTGGTTAGCCCTGATTATAAGGTTCTCGGTGTCGATAGACTTCGCGTGGTGGACGGCTCAACGTTTTCCGAGTCACCGGGGACTAATCCTCAGGCCACTGTTATGATGATGGGCAGGTACATGGGACTGAAGACTTTAAGAGAGAGGTTGGGGAAAACGACTGGTATATAA 1776 0.4696 MASVSTIKFLICLVFCLFTSPASCQGKKNRLNQNGYRFIRKASSFTPSSPISTKWNSEGYDYIIVGGGTAGCPLAATLSEKFRVLVLERGGVPFNNPNVSFMENFHITLADTSATSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSRFIEKVGWDAKVVNESYPWVEKQIVYRPKIAPWQQAVRDGLLDVGVSPFNGFTFDHVHGTKVGGTIFDRFGRRHSAAELLASANPRKLSVLTYATVHKIAFETRGKRPKAVGVIFKDENGKQHEAFLRNNRQSEVIVSCGAIGTPQLLMLSGIGPKEELERLNITVVLDNPYVGKGMADNPLNTIFVPSKRPVRQSLIETVGITNMGVYIEASSGFGQSNDSIHCHHGILSAEIGQLSTIPPHKRSPEIVQEYVKSKQEIPVEAFRGGFILSKVASPWSTGELKLINTNVEDNPSVTFNYFNHPYDVQRCVEGIRMAAKVVHSNRFTNYTLCDKDSTETLLNLTVKANVNLVPKHVNDTKSLQQFCKDTVITIWHYHGGCHVGQVVSPDYKVLGVDRLRVVDGSTFSESPGTNPQATVMMMGRYMGLKTLRERLGKTTGI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0598 591 Pfam GMC oxidoreductase 428 574 IPR007867 GO:0016614
Alju11g0598 591 Pfam GMC oxidoreductase 60 332 IPR000172 GO:0016614|GO:0050660
Alju11g0598 591 PANTHER OSJNBA0019K04.7 PROTEIN 14 585 - -
Alju11g0598 591 PIRSF Alcohol_oxidase 41 589 IPR012132 GO:0050660
Alju11g0598 591 ProSitePatterns GMC oxidoreductases signature 1. 132 155 IPR000172 GO:0016614|GO:0050660
Alju11g0598 591 Gene3D - 177 523 - -
Alju11g0598 591 SUPERFAMILY FAD/NAD(P)-binding domain 55 577 IPR036188 -
Alju11g0598 591 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
Alju11g0598 591 Gene3D - 60 573 IPR036188 -
Alju11g0598 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0598 Alju-ChrAlju11 6719325 6726978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0598 9 584 Miscellaneous Gene Families AT5G51950 49.914 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0598 11 6719325 6726978 Alju05g1793 05 49331411 49338023 CCT
Alju11g0598 11 6719325 6726978 Alju11g0598 11 6719325 6726978 ECH